Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ovis_20aries_20[refseq_20GCF_5F000298735.2_202015-11-20] 5,466 sequences; 2,615,516,299 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq3 107 3e-18 seq20 105 9e-18 seq17 105 9e-18 seq11 105 9e-18 seq1 105 9e-18 seq290 104 3e-17 seq15 89.7 7e-13 seq10 89.7 7e-13 >seq3 Length=223996068 Score = 107 bits (118), Expect = 3e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715 ||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 165158707 ATTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 165158766 Query 8716 TCCCCGACGAGGAG 8729 ||||||||| |||| Sbjct 165158767 TCCCCGACGGGGAG 165158780 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 167524846 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 167524905 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 167524906 CCCGACGGGGAG 167524917 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 165158709 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 165158768 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 165158769 CCCGACGGGGAGG 165158781 Score = 96.9 bits (106), Expect = 5e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409 || |||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||| Sbjct 165158783 CACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 165158724 Query 139410 CTATACTAACGAGGATTT 139427 ||||||||||||||| || Sbjct 165158723 CTATACTAACGAGGAATT 165158706 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 167524846 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 167524905 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 167524906 CCCGACGGGGAGG 167524918 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 167524917 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 167524858 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 167524857 TACTAACGAGGA 167524846 >seq20 Length=51049468 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 29958786 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 29958845 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 29958846 CCCCGACGGGGAG 29958858 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 30013263 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 30013204 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 30013203 CCCCGACGGGGAG 30013191 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 29958787 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 29958846 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 29958847 CCCGACGGGGAG 29958858 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 30013262 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 30013203 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 30013202 CCCGACGGGGAG 30013191 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 29958858 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29958799 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 29958798 TACTAACGAGGA 29958787 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 30013191 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 30013250 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 30013251 TACTAACGAGGA 30013262 >seq17 Length=72251135 Score = 105 bits (116), Expect = 9e-18 Identities = 69/75 (92%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 50440337 AGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 50440396 Query 11787 TCCCCGACGAGGAGG 11801 ||||||||| ||||| Sbjct 50440397 TCCCCGACGGGGAGG 50440411 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 50340691 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 50340750 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 50340751 CCCGACGGGGAG 50340762 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 50437474 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 50437533 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 50437534 CCCCGACGGGGAGG 50437547 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 50437475 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 50437534 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 50437535 CCCGACGGGGAG 50437546 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 50440336 TAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 50440395 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 50440396 TTCCCCGACGGGGAG 50440410 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 50340691 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 50340750 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 50340751 CCCGACGGGGAGG 50340763 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 50340762 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 50340703 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 50340702 TACTAACGAGGA 50340691 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 50437546 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 50437487 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 50437486 TACTAACGAGGA 50437475 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 50440410 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 50440351 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 50440350 TACTAACGAGGA 50440339 >seq11 Length=62170480 Score = 105 bits (116), Expect = 9e-18 Identities = 74/83 (89%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 11720 TGTAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGG 11778 |||| | || ||||||||||||||||||| ||||| |||| ||||| | ||||||||||| Sbjct 27366633 TGTAGCTCACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGG 27366574 Query 11779 GGTTCGATTCCCCGACGAGGAGG 11801 ||||||||||||||||| ||||| Sbjct 27366573 GGTTCGATTCCCCGACGGGGAGG 27366551 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 27366623 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 27366564 Query 8718 CCCGACGAGGAGCAG 8732 ||||||| |||| || Sbjct 27366563 CCCGACGGGGAGGAG 27366549 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 27366552 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 27366611 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 27366612 TACTAACGAGGA 27366623 >seq1 Length=275406953 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 110887647 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 110887706 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 110887707 CCCCGACGGGGAG 110887719 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 110814667 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 110814726 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 110814727 CCCCGACGGGGAGG 110814740 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 110814668 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 110814727 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 110814728 CCCGACGGGGAG 110814739 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 110887648 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 110887707 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 110887708 CCCGACGGGGAGG 110887720 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 110805945 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 110806004 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 110806005 CCCGACG-GGAG 110806015 Score = 98.7 bits (108), Expect = 1e-15 Identities = 67/73 (92%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 110805944 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 110806003 Query 11788 CCCCGACGAGGAG 11800 |||||||| |||| Sbjct 110806004 CCCCGACG-GGAG 110806015 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 110814739 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 110814680 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 110814679 TACTAACGAGGA 110814668 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 110887719 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 110887660 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 110887659 TACTAACGAGGA 110887648 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 110806015 CTCC-CGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 110805957 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 110805956 TACTAACGAGGA 110805945 >seq290 Length=5419 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 1678 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 1619 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 1618 CCCCGACGGGGAGG 1605 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1677 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1618 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1617 CCCGACGGGGAG 1606 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 2943 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 2884 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 2883 CCCCGACGGGGAGG 2870 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 2942 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2883 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2882 CCCGACGGGGAG 2871 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 5082 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 5023 Query 11788 CCCCGACGAGGAGG 11801 |||||||| ||||| Sbjct 5022 CCCCGACGGGGAGG 5009 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 5081 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 5022 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 5021 CCCGACGGGGAG 5010 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1606 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1665 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 1666 TACTAACGAGGA 1677 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2871 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2930 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 2931 TACTAACGAGGA 2942 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 5010 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5069 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 5070 TACTAACGAGGA 5081 >seq15 Length=80783214 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||| || Sbjct 5991247 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGTTT 5991188 Query 11788 CCCCGACGAGGAGG 11801 ||| ||| ||||| Sbjct 5991187 CCCTGACAGGGAGG 5991174 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||| ||| Sbjct 5991246 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGTTTC 5991187 Query 8718 CCCGACGAGGAG 8729 || ||| |||| Sbjct 5991186 CCTGACAGGGAG 5991175 >seq10 Length=86377204 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| || || ||| ||||| | |||||||||||||||||||| Sbjct 24023820 GTCCTCGTTAGTATAGTGGTGAGGATCCCCATCTGTTACGCGGGAGACCGGGGTTCGATT 24023879 Query 11788 CCCCGACGAGGAGG 11801 ||| |||| ||||| Sbjct 24023880 CCCTGACGGGGAGG 24023893 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| || || ||| ||||| | ||||||||||||||||||||| Sbjct 24023821 TCCTCGTTAGTATAGTGGTGAGGATCCCCATCTGTTACGCGGGAGACCGGGGTTCGATTC 24023880 Query 8718 CCCGACGAGGAG 8729 || |||| |||| Sbjct 24023881 CCTGACGGGGAG 24023892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652800194379040