Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ovis_20aries_20[refseq_20GCF_5F000298735.2_202015-11-20] 5,466 sequences; 2,615,516,299 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 7e-13 >seq7 Length=100009711 Score = 89.7 bits (98), Expect = 7e-13 Identities = 192/284 (68%), Gaps = 10/284 (4%) Strand=Plus/Minus Query 14268 TGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC 14327 ||| || | ||||| || ||||||||||| ||||| ||||||||| | ||| | || | Sbjct 47637100 TGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTC 47637043 Query 14328 G--GGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCA 14385 ||| ||| || | ||| ||| |||||| ||| ||| |||||| |||| Sbjct 47637042 CATGGATGCCTGGCTCTGTTCCCTACCACCCCAAGTATCACATCTCAGACATGACTGCCA 47636983 Query 14386 AGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACC 14445 | |||| | ||||||||||| || ||||||| ||| ||| | ||||| | || Sbjct 47636982 TCGCCAGGCTGGTCAAGTGGCAGGACCACGAGGGAGATGTCAGCATGGGGGCACCTTATG 47636923 Query 14446 CGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGT 14505 | || ||| || ||||| | ||||||||||| | ||| | || ||| || | | Sbjct 47636922 CACCCTGCTCGGGAATCCATCAGCGGGCCATCTGCATTTATGGGGCTGGGGACCTGCACT 47636863 Query 14506 GG---CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 || || ||| || ||||| || || |||||||| ||| Sbjct 47636862 GGATTCTCCAGA---ACCATCACCTCTTGGCAAACAAGTTTGAC 47636822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658694191644160