Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq150 152 4e-32 >seq150 Length=2801850 Score = 152 bits (168), Expect = 4e-32 Identities = 322/473 (68%), Gaps = 7/473 (1%) Strand=Plus/Plus Query 18870 CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGA 18929 |||||| | || || ||||||| || || || ||||| ||||| ||| || | || Sbjct 65012 CAAGGAGTAGACCAACTGCAAAAGGTGATTGACACAATCAAAACCAACTGTGATGACAGA 65071 Query 18930 CGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGT 18989 |||| || | | ||||||||||| ||| | || ||||||| || |||| || Sbjct 65072 AGAATCATCCTGTGTGGGTGGAATCCAAAAGATCTTCCTTTAATGG--CT-CCTCTCTGC 65128 Query 18990 CACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGA 19049 || | | || ||||| ||| | | ||| ||||| | |||||||| |||||| ||| Sbjct 65129 CATTCCCTTTGCCAGTTCTACCTGGAAAATGGTGAGCTGTCCTGCCAGTTATACCGGAGC 65188 Query 19050 TCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTAC 19109 || || || |||||||| | || || | ||| | || | ||||| || || |||||| Sbjct 65189 TCAGGAGACATGGGCCTGGTTGTGCCCTCCAATGTCGCCAGCTATGCCCTGCTCACCTAC 65248 Query 19110 ATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCA 19169 | | | || ||||| || || || | || || || ||||| |||| |||||| Sbjct 65249 AGGATGGTACACACCACAGGCCTGAAGCCCAGTGACTTCATACATACTTTGGGAGATGCA 65308 Query 19170 CATATTTACTTGAATCATATAGATGCT-TTAAAAGTGCAGCTAGCTCGATCCCCAAAACC 19228 ||||||||| ||| |||| | || ||| | ||| ||||||| || |||| || Sbjct 65309 CATATTTACCTGAGTCATGTTGA-GCTGCTGAAAATGCAGCTTCAGTGAGAACCAAGGCC 65367 Query 19229 TTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGA-TATAAACGACTTTAAATGGGACG 19287 ||| || ||||| || || |||| || ||| || | ||||| || | | Sbjct 65368 TTTCCCGAAGCTTAAGATCCTTTGAAAAGT-TGAGACAATTGATGACTTCAAGGTTAAAG 65426 Query 19288 ATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAATGGAAATGGCT 19340 | |||||| |||| || || ||||| |||| | ||||||||||||||||| Sbjct 65427 ACTTTCAGGTTGAGGGGTACAATCCTCACCTTACTATAAAAATGGAAATGGCT 65479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399258716653965