Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq62 82.4 7e-11 >seq62 Length=14533578 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/230 (68%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 28941 TTTATAAGTAATAGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATT 29000 |||| | || ||| || ||||||||||| ||| | || || |||| ||||| ||||| Sbjct 3815425 TTTAAACGTTTTAG-GTCAAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATC 3815483 Query 29001 ACCGCCGAAACGGAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAA 29060 ||| || ||| ||| || || | | || | ||| || || ||||| Sbjct 3815484 ACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAG 3815543 Query 29061 GAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCC 29120 || || | ||| ||| || || || || |||||||| ||||| || ||||||||| | Sbjct 3815544 GAGGGCATCCCCCCAGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGC 3815603 Query 29121 AAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||| | | |||||||| || |||||||| || || || ||| |||| Sbjct 3815604 CGCACTCTTTCTGATTACAACATCCAGAAGGAGTCGACCCTGCACCTGGT 3815653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428073014679935