Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq150 150 1e-31 >seq150 Length=2801850 Score = 150 bits (166), Expect = 1e-31 Identities = 383/580 (66%), Gaps = 22/580 (4%) Strand=Plus/Plus Query 20039 ATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTAT 20098 |||||||||| | | || || |||| ||||| | ||| || ||| | || ||||| Sbjct 64767 ATGAATTTCCTCTGCTGACAACCAAACCTGTATTCTAGAAGGGTGTTTTGGAGGAGTTGC 64826 Query 20099 TATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTT 20158 | |||||||| || ||||| ||||| || || || || |||||||| || | Sbjct 64827 TGTGGTTTATCAAGGGATCCACAAACGCTTGGGAACTGTCTTCCAAGGGAGTTAAAATCT 64886 Query 20159 GGAGCGCACATGGATC-TAAGCAATTTTTACACAGCA-ATGGATTTGACAACCGTCAAGA 20216 || | || |||| || | || | | || ||||| || ||| |||| | |||| Sbjct 64887 GGGACTCAAATGGGTCCTGAG-ACCTCTTGGACAGCCGAT--ATTCTGCAACAGAGAAGA 64943 Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276 ||||| || || || || ||| |||||||||| | ||| || Sbjct 64944 AGGGGACTTAGGCCCAGTTTATAATTTTCAATGGAAA--------------ATACAAAGA 64989 Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 | ||| || |||||| ||| ||||||||||| ||| | ||||| || ||| | ||| Sbjct 64990 TAAGAATTCAGATTATTCTGGTCAAGGAGTAGACCAACTGCAAAAGGTGATTGACACAAT 65049 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||||| ||| | ||||||||||| || | || | ||||| | |||||| | || Sbjct 65050 CAAAACCAACTGTGATGACAGAAGAATCATCCTGTGTGGGTGGAATCCAAAAGATCTTCC 65109 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATT 20456 |||||||||| |||| || ||| || ||||| || ||| | | ||| ||| | Sbjct 65110 TTTAATGGCT---CCTCTCTGCCATTCCCTTTGCCAGTTCTACCTGGAAAATGGTGAGCT 65166 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||| || || | || | | || | || ||||| |||| ||| || | |||| | || Sbjct 65167 GTCCTGCCAGTTATACCGGAGCTCAGGAGACATGGGCCTGGTTGTGCCCTCCAATGTCGC 65226 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 || ||||| ||||| || || | ||| | ||| |||| | || | ||||||| Sbjct 65227 CAGCTATGCCCTGCTCACCTACAGGATGGTACACACCACAGGCCTGAAGCCCAGTGACTT 65286 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCAT 20616 | || || | ||||| || ||||||||||| | |||| Sbjct 65287 CATACATACTTTGGGAGATGCACATATTTACCTGAGTCAT 65326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398938913124265