Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 >seq5 Length=45903626 Score = 140 bits (154), Expect = 3e-28 Identities = 122/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| |||||||||||||| ||||||||| Sbjct 36360291 GGTTACCTGGGTTGCCAAGCGTTGTCCGAGATGATCCAGTTTTACTTGGAGGAGGTGATG 36360350 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || | | || ||||||||| ||||||| ||||| |||||||||||| Sbjct 36360351 CCCCAGGCTGAGAACGAGGACCCAGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAG 36360410 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || || || || || ||||||| ||||| Sbjct 36360411 CTGAAGACCCTCCGGCTGAGACTGCGGCGCTG 36360442 Score = 134 bits (148), Expect = 1e-26 Identities = 121/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || |||| || ||||| || | || |||||||| |||||||||||||| ||||||||| Sbjct 36359332 GGTTACCCGGGTTGCCAAGCGTTGTCCGAGATGATCCAGTTTTACTTGGAGGAGGTGATG 36359391 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || | | || ||||||||| ||||||| ||||| |||||||||||| Sbjct 36359392 CCCCAGGCTGAGAACGAGGACCCAGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAG 36359451 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || || || || || ||||||| ||||| Sbjct 36359452 CTGAAGACCCTCCGGCTGAGACTGCGGCGCTG 36359483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447468445976240