Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq75 96.9 2e-15 >seq75 Length=11179515 Score = 96.9 bits (106), Expect = 2e-15 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||||||| ||||| || || | |||||| Sbjct 1480904 GCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCCATG 1480845 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | || ||||||||||| | ||| || || || || ||| |||||| ||||| || Sbjct 1480844 T-CTCCTGACCTCTGGTACAACTGGCAGGACAGTTCACCGTTCACCACGTAGAACTGGCA 1480786 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | | | ||||||||| || || || || Sbjct 1480785 AAGAGCATGGCACGGAGGTAGGGCCATCAG 1480756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339928765824021