Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_007061.1 Length=42802 Score E Sequences producing significant alignments: (Bits) Value seq449 199 1e-46 >seq449 Length=32345 Score = 199 bits (220), Expect = 1e-46 Identities = 754/1161 (65%), Gaps = 39/1161 (3%) Strand=Plus/Plus Query 577 AGAAGTCTGGAACTGCTTTATAAACGATAAACCCAAAGTATTAATA-GCGAGTGGTGCAA 635 |||||| | || ||| ||| || || || || || ||||||| || | ||| |||| Sbjct 7901 AGAAGTATTAAATTGCATTAGAAGAGAAAAGCCGAAGATATTAATTTGCTA-TGGAGCAA 7959 Query 636 AAAGGGCAGGTAAAACATATGTGTTCA-TACTGCtttttttAATGCATATAGCTACTTAT 694 || || || ||||| ||||| || || ||||||||| | || ||||||| ||| Sbjct 7960 TGAGAGCTGGGAAAACTTATGTTTTATCTATTGCTTTTTTATCT-CACATAGCTAAATAT 8018 Query 695 AAAGACAAGGGGCTTAACTTCATTATTGGAGGAGCAACGCAAGCATCTATAAGACGTAAC 754 ||| | || || ||||| || |||||||| | || |||| | | || Sbjct 8019 GAAGGTCAAAATAAAAATTTTATTATCGGTGGAGCAACTTATGCGAATATATGGAGAAAT 8078 Query 755 ATACTAGATGATATGGAGTTAATACTAGGTAG-AGAGTTAACACTCGACAAATCTAACGC 813 ||| || ||||| |||| | | || | | | | |||| ||| | ||| ||| Sbjct 8079 ATATTAAATGATTGGGAGACACTCTTAAGCATTAAAATTAA-ACTTCATAAAGATAATAG 8137 Query 814 AGTCAAAATATTCGGTAATAAAGTGTATGTATTCGACGGACAAAACTCGGATGCATGGAA 873 | | ||||||| ||||| | |||||||| | ||| | || | | ||||||| Sbjct 8138 TTTTGATTTATTCGGGAATAAGATTTATGTATTTGGTGGAGATAATGCCTCTTCATGGAA 8197 Query 874 AAAAGCGCGTGGTTTTACTTCAGCAGGTGCTTTTTTAAATGAGGGAACAGCATTACACAA 933 | || | || || ||| | |||| || || | ||||| | |||||||||||| || Sbjct 8198 AGCAGTAAGAGGATTCACTGCTACAGGAGCATTACTTAATGAAGCAACAGCATTACATAA 8257 Query 934 TATGTTTATTAAAGAAGTGTTCT-CACGTTGTAGTCACAA--AGGCGCGAGAATATTAAT 990 || ||| |||||||| ||| | | | ||| ||| | ||| || || | || Sbjct 8258 TACTTTTGTTAAAGAA-TGTATTGCGAGATGT--TCAGATGCAGGAGCAGTTATTTATAT 8314 Query 991 TGATACAAACCCCGAAAACCCAATGCATCCAGTTAAAAAAGATTACATTGATAAGAGTGG 1050 ||||| ||||| || || || | ||| ||||||| ||||| | ||||| || Sbjct 8315 GGATACTAACCCTGATAATCCTAGCCATTTTGTTAAAACTGATTATGTAGATAAATCAGG 8374 Query 1051 TCAAC--GATTATCGAATGGAAGACTAAATATCAAAGCATTTCAATTTACTTTGTTCGAC 1108 ||| |||| ||||||| ||||||| |||||||||| |||||||||| || Sbjct 8375 --AACTAGATTTAAAAATGGAAAGTTAAATATACAAGCATTTCATTTTACTTTGTATGAT 8432 Query 1109 AATACATTTTTAGATGAAGAATATATTGAATCGATTATAGCGAGT---ACACCAACAGGA 1165 |||| |||||||||||||||||| |||| || ||||| | | || || | |||| Sbjct 8433 AATAATTTTTTAGATGAAGAATATGTTGA---GAGTATAGAAAATGCAACTCCGATAGGA 8489 Query 1166 ATGTTCACAGATCGTGACATTTATGGTAAGTGGGTTTCTGCTGAGGGTGTTGTATATAAA 1225 ||||| ||| | | ||| ||| || ||||| || | ||||| ||||| |||||| Sbjct 8490 ATGTTTTTTGATAGAAATATTCTTGGAAAATGGGTATCACCCGAGGGAGTTGTGTATAAA 8549 Query 1226 GATTTCAAAGAAAAAGTTCATTACATCACAGAAGAAGAATTTAAAACTAAACAAATAAAA 1285 ||||| || ||| ||| || || ||| || | ||| | |||||| Sbjct 8550 GATTTTAATATAAATACACATGTGATAAC---TCTTCAATCTATTCCAAAAGATATAAAA 8606 Query 1286 AGG-AAATAT-----GCAGGCGTCGACTGGGGATATGAGCATTATGGTTCTATTATGGTT 1339 || || || | || || |||||||| ||| |||| | || || || | || Sbjct 8607 TGGTTAAGATTTTGGGGTGGAGTGGACTGGGGTTATCAGCACAAAGGCTCAATAACTATT 8666 Query 1340 GTAGCGGAA--GACTTCGACGGAAACAAGTACGTTATTGAAGAACACGCACACAGACATA 1397 | ||||| || || || | || | ||||||||||| || | | ||| Sbjct 8667 TT--CGGAATGGATACAGATCATAATATCTATATGATTGAAGAACATACAAAGCAATATA 8724 Query 1398 AAGAAATAGATGACTGGGTAGCTATTGCAAAAGGAGTTATAAAAAGGCATGGCGATATTC 1457 ||||||||||| ||||||| | || |||| ||||| | | |||| |||||| Sbjct 8725 AAGAAATAGATTACTGGGTTAAAGTAGCTAAAGATTTTATATCTAAGTATGGTAATATTC 8784 Query 1458 TTTTTTATTGTGATACAGCTAGACCTGAACATATTGAACGATTTAGAAGAGAGAAG--AT 1515 |||| | ||| |||| ||||| || ||| ||| || ||| || |||||| || Sbjct 8785 AATTTTTTGCAGATTCAGCAAGACCAGAGCATGTTGCTCGTTTT--AATCGAGAAGGTAT 8842 Query 1516 AAAAGCAAGATATGCTGACAAAGCTGTTATTGCTGGCATTGAAGTTATTTCTAGGTTATT 1575 ||| | | ||||| | ||| || | ||||| || ||||| |||| | | || Sbjct 8843 TAAATGTATAAATGCTAATAAAAAAGTATTAGCTGGTATAGAAGTAGTTTCCAAACTTTT 8902 Query 1576 CAAGTTAAATAAAATATTCATTATCAAAGAAAAAGTTAGTTTGTTTAAAGAAGAAATATA 1635 || | | || |||| |||| |||||||| || | | | |||||| | | Sbjct 8903 AAAAGTGAGGAAGCTATTTTTTATTAAAGAAAATATTGATAAGATACTTGAAGAATTTAA 8962 Query 1636 CAACTACGTTTGGAAAGATAATGCAGACGAACCAGTTAAATTAAACGATGACACATTAGA 1695 | || |||||||| || | | | |||||||| ||| ||| ||||| | |||| Sbjct 8963 CCTATATGTTTGGAATGAAACAACTGGAGAACCAGTAAAACAAAATGATGATGTACTAGA 9022 Query 1696 TGCGTTAAGATATGCAGTTTA 1716 | | |||||||||||| |||| Sbjct 9023 TTCATTAAGATATGCAATTTA 9043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136762935762936