Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16]
50,377 sequences; 2,578,019,207 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq18 98.7 3e-15
>seq18
Length=30197870
Score = 98.7 bits (108), Expect = 3e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
||||| |||||||| ||||| |||||| ||| || ||||||||||||||||| |
Sbjct 1321572 GGGGCATTTGCTATTTATCTGGAGCCTTGGCATTTAGACATTTTTGAGTTTCTTGATTTA 1321513
Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957
||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| ||
Sbjct 1321512 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGAGACCTTTTCTTTGCCCTTTGGATT 1321453
Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984
| || | || ||||| || ||||||
Sbjct 1321452 CCGGATCTCTTCATGAAACGAGTGGAG 1321426
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| |||||||| || || || |||
Sbjct 1319496 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 1319437
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 1319436 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACGATCAAATGC 1319377
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || || |||
Sbjct 1319376 AGCAACCTGTGCACAGAAATAGTAGAGTATACC 1319344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302512343494814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |