Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_011318.1 Length=38753 Score E Sequences producing significant alignments: (Bits) Value seq449 181 3e-41 >seq449 Length=32345 Score = 181 bits (200), Expect = 3e-41 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34389 AGATTTACGTTAGCAGTAAACAGAAAGTTCAAGAAAGATGAAGCTGATTTTATAAATTGT 34448 |||||||| | ||||| | ||| | || ||||||||||||||||||||||||||| Sbjct 5080 AGATTTACAGTTGCAGTTACTAGAGCAATGAAAAAAGATGAAGCTGATTTTATAAATTGT 5139 Query 34449 ATAGCGTTCGGTAAAACTGCCGATATAATAAATCAATATTTCTCTAAAGGTTCTCAAATT 34508 ||||| || || || | | || | ||| |||||||| |||||||| ||||| Sbjct 5140 ATAGCATTTGGGAAGATGGGAGAAACAATTGCACAATATTTTACTAAAGGTAAGCAAATA 5199 Query 34509 GCTATAAGCGGAAATATAAGAACTGGAAGTTATGAAGCTCAAGATGGTACTAGAAGATAT 34568 ||||| || |||||||| ||||| || || || || ||| | |||||||||| ||||||| Sbjct 5200 GCTATTAGTGGAAATATTAGAACAGGCAGCTACGATGCTAAGGATGGTACTAAAAGATAT 5259 Query 34569 ACAACAGATGTAGTTGTAGAAACATTTGATTTTAT 34603 |||||||||||||| || ||||||||||| ||||| Sbjct 5260 ACAACAGATGTAGTAGTTGAAACATTTGAATTTAT 5294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123813886868910