Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq152 87.8 3e-12 >seq152 Length=2762259 Score = 87.8 bits (96), Expect = 3e-12 Identities = 154/222 (69%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 197419 ACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCT 197478 ||||| |||||| |||| | ||||| || || ||| ||| | || || || | || Sbjct 2198346 ACAGAGATTGAGCACGTCACCTGGAATGGTCCCCAAAAAGCTCTTGCTTTAGC-AGTCAC 2198404 Query 197479 AAAGACG----TTACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAAC 197534 | | ||| ||| ||| ||||| |||||||||||| || | ||||| ||| Sbjct 2198405 AGAAACGCAAGTTATCATTATGGACAAAAGCTACCAGAACCGACTGAACATCAGC---TG 2198461 Query 197535 CAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCA 197594 |||||||| |||| || || |||||||| |||| || || || || || || ||||| Sbjct 2198462 GAACTACTCCTTGTCTATCAGCAACCTGACTTTGAAAGACGCGGGATCCTACAAAGCCCA 2198521 Query 197595 AATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATT 197636 || ||| || ||||| | |||||| | | |||||||| Sbjct 2198522 GATAAACCGCAAGAATTCTGAGGTCACCGCTGATGAGGAATT 2198563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701746622935280