Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq162 239 3e-57 seq4 226 2e-53 seq165 181 7e-40 seq129 181 7e-40 seq5 163 2e-34 seq244 159 2e-33 seq11736 158 8e-33 seq18 113 3e-19 seq153 107 1e-17 seq56 104 2e-16 seq91 91.5 1e-12 seq63 89.7 3e-12 >seq162 Length=2381785 Score = 239 bits (264), Expect = 3e-57 Identities = 382/541 (71%), Gaps = 8/541 (1%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||||| || | || || Sbjct 1839478 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCCAGCACGGGAA 1839537 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || |||| || ||| ||||| | ||||| Sbjct 1839538 AGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTAC 1839597 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| || |||| | || || |||||||| || |||||| |||| || || || Sbjct 1839598 TGACACCGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATGAACCCCACCAA 1839657 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||| | ||| | ||||||| |||| || || || | ||||||||| Sbjct 1839658 CACAGTTTTTGATTCCAAACGCCTGATTGGACGTAGATTCGACGACGCTGTTGTCCAATC 1839717 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | |||| | |||| || || | || | | ||| Sbjct 1839718 TGATATGAAGCATTGGCCCTTCATGGTGGTGAATGATGCCGGCAGGCCCAAGGTCCAAGT 1839777 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 |||||| | || || || ||| || | || || || | ||||| |||||||| Sbjct 1839778 AGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGAGGAAGTATCTTCTATGGTTTTG 1839835 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743 | || ||||| ||| ||| ||| | || ||||| |||| || ||| |||| ||| Sbjct 1839836 ACAAAGATGAAGGAAATCGCAGAG-GCTTACCTTGG-GAAGACTGTTACTAATGCTGTAG 1839893 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || |||||||| |||||||| ||||| || || |||||||| |||| | Sbjct 1839894 TCACAGTACCTGCCTATTTTAACGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTA 1839953 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| ||||||||||| | || || || ||||| |||||||| || || | ||||| | Sbjct 1839954 TTGCCGGTCTTAATGTACTTCGAATCATCAATGAGCCAACAGCTGCTGCTATCGCTTACG 1840013 Query 474864 G 474864 | Sbjct 1840014 G 1840014 >seq4 Length=46648546 Score = 226 bits (250), Expect = 2e-53 Identities = 377/540 (70%), Gaps = 6/540 (1%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||||| || | || || Sbjct 13865526 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCCAGCACGGGAA 13865467 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || |||| || ||| ||||| | ||||| Sbjct 13865466 AGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTAC 13865407 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| || |||| | || || |||||||| || |||||| |||| || || || Sbjct 13865406 TGACACCGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATGAACCCCACCAA 13865347 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||||||| ||| || || ||| | ||||||||| Sbjct 13865346 CACAGTTTTTGATGCCAAACACCTGATTGGACGTGGATTCGAAGATGCTGTTGTCCAATC 13865287 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | |||| | |||| || ||| | || | || ||| Sbjct 13865286 TGATATGAAGCATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGATCCAAGT 13865227 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 |||||| | || || || ||| || | || | | | ||||| |||||||| Sbjct 13865226 AGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGTGGAGGTATCTTCTATGGTTTTG 13865169 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 | || ||||| ||| ||| ||| | || ||||| | || || |||| ||| | Sbjct 13865168 ACAAAGATGAAGGAAATCGCAGAG-GCTTACCTTGGGAAGCCTGTTACCAATGCTGTAGT 13865110 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 || || || || ||||||||||||||||| ||||| || || |||||||| |||| || Sbjct 13865109 CACAGTACCTGCCTATTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTAT 13865050 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||||||||||| | || || || ||||| |||| || || || | ||||| || Sbjct 13865049 TGCTGGTCTTAATGTACTTCGAATCATCAATGAGCCAAACGCTGCTGCTATCGCTTAGGG 13864990 Score = 217 bits (240), Expect = 1e-50 Identities = 375/540 (69%), Gaps = 6/540 (1%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||||| | | | || Sbjct 13870694 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCTAGCACAGGAA 13870635 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || |||| || ||| ||||| | ||||| Sbjct 13870634 AGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTAC 13870575 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| || |||| | || || |||||||| || |||||| |||| || || || Sbjct 13870574 TGACACCGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATGAACCCCACCAA 13870515 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||||||| ||| || || ||| | ||||||||| Sbjct 13870514 CACAGTTTTTGATGCCAAACACCTGATTGGACGTGGATTCGAAGATGCTGTTGTCCAATC 13870455 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | |||| | |||| || ||| | || | || ||| Sbjct 13870454 TGATATGAAGCATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGATCCAAGT 13870395 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 |||||| | || || || ||| || | || | | | ||||| |||||||| Sbjct 13870394 AGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGTGGAGGTATCTTCTATGGTTTTG 13870337 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 | || ||||| ||| ||| ||| | || ||||| | || || |||| ||| | Sbjct 13870336 ACAAAGATGAAGGAAATCGCAGAG-GCTTACCTTGGGAAGCCTGTTACCAATGCTGTAGT 13870278 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 || || || || ||||||||||||||||| ||||| || || |||||||| |||| || Sbjct 13870277 CACAGTACCTGCCTATTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTAT 13870218 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| ||||||||||| | || || || ||||| |||| || || || | ||||| || Sbjct 13870217 TGCTGGTCTTAATGTACTTCGAATCATCAATGAGCCAAACGCTGCTGCTATCGCTTAGGG 13870158 >seq165 Length=2285742 Score = 181 bits (200), Expect = 7e-40 Identities = 376/550 (68%), Gaps = 21/550 (4%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG---TTTGGCAAAATGG 474384 |||| ||| |||| | | || || || ||| |||||| | || | | ||| | | Sbjct 2157456 TGCAGGTGGCATTGGTCTTGGCACCACCTACTCTTGTGTGGGTGCCTTCTAGCACA---G 2157512 Query 474385 TAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTT 474444 ||||| ||||||||||||||||| || || || |||| || ||| ||||| | || Sbjct 2157513 GAAAGTGGAAATAATTGCCAATGATCAGGGAAACTGAACCACCCCAAGTTATGTAGCCTT 2157572 Query 474445 TACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGT 474504 |||||| ||||||| | || || |||||||| || |||||| |||| | || || Sbjct 2157573 TACTGACACTGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAACGAACCCCAC 2157632 Query 474505 TAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCA 474564 || || |||||||||| ||| | ||||||| ||| || || ||| | |||||| Sbjct 2157633 CAACACAGTTTTTGATGCCAAACGCCTGATTGGGCGTGGATTCGACGATGCTGTTGTCCA 2157692 Query 474565 ATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624 |||||||||| || ||||| | | |||| | |||| || ||| | || | | | Sbjct 2157693 ATCTGATATGAAGCACTGGCCCCTCATGGTGGTGAATGATGCTGGCAGGCCCAAGGTCCA 2157752 Query 474625 AG--CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 || |||||| | || || || ||| || | || || | | ||||| |||||| Sbjct 2157753 AGTAGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTT 2157810 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAG 474740 || | ||| || || ||| | | ||| | || ||||| |||| || || |||| | Sbjct 2157811 TT-GACAAGATAAAGGAAATCACAGAG-GCTTACCTTGG-GAAGACTGTTACCAATGCTG 2157867 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 || | || || || || |||||||| || |||| | ||| || || |||||||| |||| Sbjct 2157868 TAGTCACAGTACCTGCCTATTTTAACAATGCTCAGCATCAGGCTACCAAAGATGCTGGAA 2157927 Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATG------AACCAACAGCAGCCGCAC 474854 ||||| ||||||||||| | | || || || | | ||||| || || || Sbjct 2157928 CTATTGCTGGTCTTAATGTACTTTGAATCATCAAAGTACAGCAGCCAACTGCTGCTGCTA 2157987 Query 474855 TTGCTTATGG 474864 |||||||||| Sbjct 2157988 TTGCTTATGG 2157997 Score = 120 bits (132), Expect = 2e-21 Identities = 371/562 (66%), Gaps = 13/562 (2%) Strand=Plus/Plus Query 475665 TCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAA 475724 |||| ||| | || || ||||| || || |||| || ||||| | || || ||||| | Sbjct 2158410 TCAG-GATGCCAAGCTAGACAAGTCTCAGATCCACGATATTGTCTTGGTGGGTGGTTCTA 2158468 Query 475725 CAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAAT 475783 || | || || || || ||||| | || | |||| ||||| || | | ||| Sbjct 2158469 CACGTATCCCCAAGATTC-AGAAACTTCTACAAGACTTTTTCAATGGGAAGGAACTGAAT 2158527 Query 475784 GAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTA 475843 | || | || |||||||||||||| || ||||| || |||||||| | ||| || | Sbjct 2158528 AAGAGCATCAACCCTGATGAAGCTGTCGCTTATGGTGCAGCTGTCCAGGTAGCCATCCTT 2158587 Query 475844 TCAGGTCAATCAGACGAGAAACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTT 475900 | || | || | |||| | || ||| | || ||||| | || ||||| ||| Sbjct 2158588 CCTGGAGA--CAAATCTGAAAATGTTCAAGATT-TGCTGCTGTTGGAGGTCACTCCCCTT 2158644 Query 475901 TCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCT 475960 || | || ||||||| | ||| || | |||||| ||| || | ||| || | Sbjct 2158645 TCTCTTGGCATTGAAACTGCTGGTGGAGTCATGACTTTTCTCATCAAGCACAATTCTACC 2158704 Query 475961 ATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACC 476020 || || ||| | | || || | || || ||||| || || | ||| | Sbjct 2158705 ATTCCTACTAAACAGACCCAAACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTC 2158764 Query 476021 ATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT 476080 || | | | ||||||||| | | || || ||||| ||| |||||| | ||| Sbjct 2158765 ATTCGGGTTTATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTACTTGGCAAGTTT 2158824 Query 476081 AATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGAT 476140 | || ||| || | |||||| ||| || |||||||| ||||| ||||| |||||| Sbjct 2158825 GAACTCACAGGCATACGTCCTGCCCCCCATGGCGTTCCTCAGATTGAGGTTACCTTTGAT 2158884 Query 476141 ATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATA--AATCTAGTAACAAGAGTA 476198 |||||||| ||||| ||||| ||||| ||||| |||| | | || || ||||| | Sbjct 2158885 ATTGATGCTAATGGCATTCTCAATGTCTCTGCTGTGGATAAGAGTACAGGAA-AAGAG-A 2158942 Query 476199 AAAATATAACTATTACAAACAA 476220 | || || || || |||||||| Sbjct 2158943 ATAAGATCACCATCACAAACAA 2158964 >seq129 Length=4582268 Score = 181 bits (200), Expect = 7e-40 Identities = 370/541 (68%), Gaps = 18/541 (3%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||| | || | || || Sbjct 151306 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACGGGAA 151247 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || ||| || ||| ||||| | ||||| Sbjct 151246 AGTGGAAATAATTGCCAACGATCAGGGAAACCAAACCACCCCAAGTTATGTCGCCTTTAC 151187 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||||| |||| |||||||| || |||||| |||| ||||| || Sbjct 151186 TGACACTGAAC----TATT---GATGCTGCAAAGAATCAAGTTGCAATGAATCC---CAA 151137 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||||||| ||| || || || | ||||||| Sbjct 151136 CACAGTTTTTGATGCCAAACATCTGATTGGAGGTAGATTCGACAATGCTGTCATCCAATC 151077 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | |||| | || | || ||| | || | | ||| Sbjct 151076 TGATATGAAGCATTGGCCCTTCATGGTGGTGAACGATGCTGGCAGGCCCAAGGTCCAAGT 151017 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 |||||| | | || || ||| || | || || | | || || |||||||| Sbjct 151016 AGAATACAAGAA--AGAGACCAAAAGTTTCTGTCCAGAGGAGGTGTCCTCTATGGTTTTG 150959 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743 | || ||||| ||||| | ||| | || ||||| |||| || || |||| ||| Sbjct 150958 ACAAAGATGAAGGAAACCACAGAG-GCTTACCTTGG-GAAGACTGTTACCAATGCTGTAG 150901 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || |||||||| | ||||| | | | || || ||| |||| |||| | Sbjct 150900 TCACAGTACCTGCCTATTTTAACAACTCTCAGCATTAGGCTACCAAACATGCTGGAAATA 150841 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| ||||||||||| |||| || || | ||| ||||| || || || ||||||||| Sbjct 150840 TTGCTGGTCTTAATGTACTACGAATCATCAGTGAGCCAACTGCTGCTGCTATTGCTTATG 150781 Query 474864 G 474864 | Sbjct 150780 G 150780 Score = 141 bits (156), Expect = 6e-28 Identities = 454/692 (66%), Gaps = 12/692 (2%) Strand=Plus/Minus Query 475496 ACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTT 475555 |||||||| || | ||||| | | |||||||| || || | | | |||||||| Sbjct 150541 ACTGCTTGCGAGCACACTAAGTGCACACTTTCTTCCAGCACCCAGGCCAGTATTGAAGTT 150482 Query 475556 GATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGAT 475615 |||||||| | ||||||||| || | | |||| |||||| | || |||||||| Sbjct 150481 GATTCTCTATATGAAGGAATGGACTTTTATACCTCTATTACTCGTGCCTGGTTTGAAGAA 150422 Query 475616 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT-CAGAGATTC 475674 | | |||| || || | | | || || || || ||| || ||| ||| | Sbjct 150421 TTAAATGCTGACCTGTTCCGTGGCATCCTGGACCCTGTAGAGAAAGCCCTTCAG-GATGC 150363 Query 475675 TAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTG-TAGGAGGTTCAACAAGAATTC 475733 || ||||||| || || |||| || ||||| |||| | || ||||| |||| || | Sbjct 150362 CAAGTTTGACAAGTCTCAGATCCACGATATTGT-CTTGATGGGTGGTTCTGCAAGTATCC 150304 Query 475734 CAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA 475792 | || || ||||| | || | |||| ||||| || | | ||| | || | Sbjct 150303 CCAAGATTC-AGAAACTTCTACAAGACTTTTTCAATGGGAAGGAACTGAATAAGAGCATC 150245 Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 | |||||||| ||||| || ||||| || |||||||| ||||| || | || || | Sbjct 150244 AGCCCTGATGAGGCTGTCGCTTATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGA- 150186 Query 475853 TCAGACGAGAAACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGT 475909 || | |||| || || ||| | || ||||| | || || | ||||| | | Sbjct 150185 -CAAATCTGAAAATACTCAAGATT-TGCTGCTGTTGGATGTCACCCGTCTTTCTCTTCGC 150128 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | ||| || | |||||| ||| || | |||||| | || || | Sbjct 150127 ATTGAAACTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCTACC 150068 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||| | | || || | || || ||||| || || | ||| ||| || | Sbjct 150067 AAACATACCCAAACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCATTCAGGTT 150008 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089 | ||||||||| | | || || ||||| ||| |||||| | | | | || | Sbjct 150007 TATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTACTTGGCAAGTCTGAACTCACA 149948 Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 || || |||||||| ||| | || |||||||| |||| || || |||||||||||||| Sbjct 149947 GGCATACCTCCTGCCCCCCGGGGTGTTCCTCAGATTGGGGTCACCTTTGATATTGATGCT 149888 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| ||||| ||||| ||||| ||||| Sbjct 149887 AATGGCATTCTCAATGTCTCTGCTGTGGATAA 149856 >seq5 Length=45903626 Score = 163 bits (180), Expect = 2e-34 Identities = 365/541 (67%), Gaps = 24/541 (4%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||| | || | | || Sbjct 20646826 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACAGGAA 20646767 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| | || || || ||| || ||| ||||| | ||||| Sbjct 20646766 AGTGGAAATAATTGCCAACAATCAGGGAAACCAAACCACCCCAAGTTATGTCACCTTTAC 20646707 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| || |||| | ||||| |||||||| | || | | | | || Sbjct 20646706 TGACACGGAACGATTGATTGGTGATGCTGCAA----------TGAACCCCACC-----AA 20646662 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||| ||| |||| ||||||||| | |||||||||| Sbjct 20646661 CACAGTTTTTGATGCCAAACACCTGACTGGACGTAGATTTGATGATGCTGCTGTCCAATC 20646602 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 ||||||| |||||||| || | || | | |||| || ||| | || | | ||| Sbjct 20646601 TGATATGAAGCATTGGCCCTTCATGGCGGTGAATGATGCTGGCAGGCCCAAGGTCCAAGT 20646542 Query 474628 A--ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | ||||| | || || || ||| || | || || | | ||||| |||||||| Sbjct 20646541 AGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTTTTG 20646484 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAA 474743 | || ||||| ||| ||| ||| | || ||||| | || || || |||| ||| Sbjct 20646483 ACAAAGATGAAGGAAATCGCAGAGG-CTTACCTTGGG-AGGACTGTTACCAATGCTGTAG 20646426 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || |||||||| |||||||| |||| || || |||||||| |||| | Sbjct 20646425 TCACAGTACCTGCCTATTTTAACGATTCTCAGTGTCAGGCTACCAAAGATGCTGGAACTA 20646366 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||| ||||||||||| | | || || | ||| || || || || | ||||||||| Sbjct 20646365 CTGCTGGTCTTAATGTACTTTGAATCATCACTGAGCCCACTGCTGCTAC-TTTGCTTATG 20646307 Query 474864 G 474864 | Sbjct 20646306 G 20646306 >seq244 Length=730160 Score = 159 bits (176), Expect = 2e-33 Identities = 332/492 (67%), Gaps = 2/492 (0%) Strand=Plus/Plus Query 474383 GGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCT 474442 ||||| ||||| || |||||||||||||| || || | || || || ||||| | Sbjct 346223 GGTAAGGTAGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCC 346282 Query 474443 TTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCT 474502 || || || || |||| || ||||| ||||| || || | || | || ||||| Sbjct 346283 TTCACCGACACGGAACGGCTCATTGGGGATGCGGCCAAGAACCAGGTAGCCATGAATCCC 346342 Query 474503 GTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTC 474562 || ||| | |||||||| ||| | ||||||| | || ||| ||||| | || Sbjct 346343 CAGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTG 346402 Query 474563 CAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATA 474622 || | |||||| || ||||||||| | || || |||| || || || || | || Sbjct 346403 CAGGCAGATATGAAACACTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTA 346462 Query 474623 GAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 || || ||| || | ||| || | || || |||| ||||| ||||| Sbjct 346463 ACAGTGTCCTACAAAGGGGAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGTA 346522 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 | | || ||||| | || || ||| | | | | || || || || |||| || Sbjct 346523 CTGACAAAGATGAAGGAGACTGCTGAGGCCTTTT-TGGGCCACCCTGTCACCAATGCTGT 346581 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 || ||||| ||||| ||||| ||||||||||| |||||||| || || ||||| || Sbjct 346582 GATAACTGTGCCAGCTTATTTCAATGATTCTCAGCGTCAAGCCACCAAGGATGCAGGTGT 346641 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| ||||| ||||| || | ||||| |||||||| ||||| || || |||| || Sbjct 346642 GATTGCGGGTCTGAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCATA 346701 Query 474862 TGGTCTTGATAA 474873 ||| | ||||| Sbjct 346702 TGGCTTAGATAA 346713 >seq11736 Length=504 Score = 158 bits (174), Expect = 8e-33 Identities = 280/404 (69%), Gaps = 6/404 (1%) Strand=Plus/Plus Query 474464 ATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCT 474523 || || |||||||| || |||||| |||| || || || || |||||||||| Sbjct 7 ATCGGTGATGCTGCAAAGAATCAAGTTGCAATGAACCCCACCAACACAGTTTTTGATGCC 66 Query 474524 AAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGG 474583 ||| ||||||| ||| || || ||| | |||||||||||||||| |||||| Sbjct 67 AAACACCTGATTGGACGTGGATTCGAAGATGCTGTTGTCCAATCTGATATGAAGCATTGG 126 Query 474584 CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCA--ATACACGCAGGTG 474641 || || | |||| | |||| || ||| | || | || ||| | ||||| | || | Sbjct 127 CCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGATCCAAGTAGAATACAAG--GGAG 184 Query 474642 AAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAA 474701 | || ||| || | || | | | ||||| |||||||| | || ||||| ||| Sbjct 185 AGACCAAAAGTTTCTATCCAGTGGAGGTATCTTCTATGGTTTTGACAAAGATGAAGGAAA 244 Query 474702 CCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 ||| ||| | || ||||| | || || |||| ||| | || || || || ||| Sbjct 245 TCGCAGAGG-CTTACCTTGGGAAGCCTGTTACCAATGCTGTAGTCACAGTACCTGCCTAT 303 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 |||||||||||||| ||||| || || |||||||| |||| ||||| ||||||||||| Sbjct 304 TTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTGCTGGTCTTAATGTA 363 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 | || || || ||||| |||| || || || | ||||| || Sbjct 364 CTTCGAATCATCAATGAGCCAAACGCTGCTGCTATCGCTTAGGG 407 >seq18 Length=30197870 Score = 113 bits (124), Expect = 3e-19 Identities = 265/393 (67%), Gaps = 8/393 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || |||||||| ||||| | ||||| || |||||||| ||||| || | || || | Sbjct 19009871 AACCCTGATGAGGCTGTCACTTATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGA- 19009813 Query 475853 TCAGACGAGAAACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGT 475909 || | |||| | || ||| | || ||||| | || ||||| ||||| | || Sbjct 19009812 -CAAATCTGAAAATGTTCAAGATT-TGCTGCTGTTGGATGTCACTCCCCTTTCTCTTGGC 19009755 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | ||| || | |||||| ||| || | |||||| | || || | Sbjct 19009754 ATTGAAACTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCTACC 19009695 Query 475970 AAAAA-ATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||| | | | | | | || | || |||||||| || || | ||| ||| || | Sbjct 19009694 AAACAGACCCAGACT-TTAACTACCTATTCTGACAACCAGCCTGGTGTGCTCATTCAGGT 19009636 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 | ||||||||| || | || || | ||| ||| |||||| | ||| | || Sbjct 19009635 TTATGAAGGTGAGCGAGCCATGACCAAGGGTAACAACCTACTTGGCAAGTTTGAACTCAC 19009576 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 ||| || ||||||| ||| | || ||||||| ||||| || || |||||||||||||| Sbjct 19009575 AGGCATACCTCCTGTCCCCCGTGGCATTCCTCAGATTGAGGTCACCTTTGATATTGATGC 19009516 Query 476149 AAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| ||||| ||||| ||||| ||||| Sbjct 19009515 TAATGGCATTCTCAATGTCTCTGCTGTGGATAA 19009483 >seq153 Length=2738751 Score = 107 bits (118), Expect = 1e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 || ||| |||| ||| | || || || || |||||||| |||||||| ||||| || || Sbjct 93014 GTTACTAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGCGTCAGGCTACC 92955 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847 |||||||| |||| ||||| ||||||||||| | || || || ||||| |||||||| Sbjct 92954 AAAGATGCTGGAACTATTGCCGGTCTTAATGTACTTCGAATCATCAATGAGCCAACAGCT 92895 Query 474848 GCCGCACTTGCTTATGG 474864 || || | ||||| || Sbjct 92894 GCTGCTATCGCTTACGG 92878 Score = 96.9 bits (106), Expect = 2e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||||| || | || || Sbjct 93987 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCCAGCACGGGAA 93928 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || |||| || ||| ||||| | ||||| Sbjct 93927 AGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTAC 93868 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCA 474493 ||| || |||| | || || |||||||| || |||||| |||| Sbjct 93867 TGACACCGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCA 93822 Score = 89.7 bits (98), Expect = 3e-12 Identities = 125/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || || ||||| ||| ||| || | ||| | || ||| || |||||||| ||| | Sbjct 91532 ACCAAGGATAACAACCTACTGGGCAAGTTTGAACTCACAGGCATACCTCCTGCCCCCCGT 91473 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || |||||||| || || || || |||||||||||||| ||||| ||||| ||||| || Sbjct 91472 GGCGTTCCTCAGATCGAGGTCACCTTTGATATTGATGCTAATGGCATTCTCAATGTCTCT 91413 Query 476171 GCTTGTGATAA-ATC-TAGTAACAAGAGTAAAAATATAACTATTACAAAC 476218 ||| ||||| | | || || ||||| || || || || || |||||| Sbjct 91412 GCTGTGGATAAGAGCACAGGAA-AAGAG-AATAAGATCACCATCACAAAC 91365 >seq56 Length=15483419 Score = 104 bits (114), Expect = 2e-16 Identities = 180/260 (69%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 474350 ACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGAC 474409 || |||||| |||||| | ||| | || | ||||| ||||||||||||||||| Sbjct 13999125 ACCACTTACTCTTGTGTGGGTGTCTTCCAGCACCAGAAAGTGGAAATAATTGCCAATGAT 13999184 Query 474410 CAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGA 474469 | || || |||| || | | |||| | |||||||| |||| ||| | || Sbjct 13999185 AAGGGAAACTGAACCACCCGGTTATATCTAC--TTTACTGACACTGGTCATGTC---GGT 13999239 Query 474470 GATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGA 474529 | |||| | || |||||| |||| || || || || |||||||| | ||| | Sbjct 13999240 GCTGCTACAAAGAATCAAGTTGCAATAAACCCCACCAACACAGTTTTTGATACCAAATGC 13999299 Query 474530 TTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTT 474589 ||||||| ||| ||||||||| | |||||||||||||||| | || ||| |||| Sbjct 13999300 CTGATTGGATGTACGTTTGATGATGCTGTTGTCCAATCTGATATGAGACAGTGGTCTTTC 13999359 Query 474590 AAGGTGATAAATGTTGGTGG 474609 | |||| | |||| || ||| Sbjct 13999360 ATGGTGGTGAATGATGCTGG 13999379 >seq91 Length=9305606 Score = 91.5 bits (100), Expect = 1e-12 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 ||||||||||||| ||| |||| ||| || || |||| | ||| | |||||| Sbjct 3697955 ACAAGATGAAGTGGACTC-CTTTTGAATG-TTGTAGTCAGACAAAGTACGTCCATCTTCC 3698012 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 |||||||| |||||||| || | || || ||||||||||||||| ||||||| || || Sbjct 3698013 AGTTGCTTGCCAGCAAAGATCAAACTCTGCTGATCAGGAGGAATTTCTTCCTTATCCCGA 3698072 Query 480684 ATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||| ||| | | ||| || ||||| Sbjct 3698073 ATCTTGGCTTTCATACTTTCTATTGTATC 3698101 >seq63 Length=13980726 Score = 89.7 bits (98), Expect = 3e-12 Identities = 124/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 299108 GCTTCTGAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGAC 299167 ||||| || ||||| |||||||||||||| |||| ||| | |||| |||||| ||| Sbjct 729483 GCTTCAGATGAAGATATTAAAAAAGCTTACCGAAAACAAGCACTCAAATTTCATCCGGAC 729542 Query 299168 AGAAATAAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTAT--AGTA 299225 | || ||| |||| |||| || ||||| |||||| | | | |||||| |||| Sbjct 729543 AAGAACAAATCTCCTCAAGCAGAGGAAAAATTTAAAGAGGTCGCAGAAGCTTATGAAGTA 729602 Query 299226 TTCTTTCAGATCCAACCAAAAAAGAAGTATATGATAAATTTGGAGAAGAAGG 299277 || | ||||| | || | |||| |||||||| | ||||| || ||||| Sbjct 729603 TTGAGT--GATCCTAAAAAGAGAGAAATATATGATCAGTTTGGGGAGGAAGG 729652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266018286040796