Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 4e-11 >seq13 Length=35234357 Score = 84.2 bits (92), Expect = 4e-11 Identities = 212/305 (70%), Gaps = 31/305 (10%) Strand=Plus/Minus Query 204238 ttactatatcatataata-ataattttatagctt-tattaaaatgttat-ttacatataa 204294 ||| ||||| |||||||| ||||||||||| || |||| | || |||| ||| |||||| Sbjct 4241868 TTAGTATATTATATAATATATAATTTTATATATTATATTTATAT-TTATATTATATATAA 4241810 Query 204295 acgaaaatataatttccatatttataattatagaaatgtatataagaaacaata---ata 204351 | | ||||||| ||||||||| |||| | | ||||||| | | | || ||| Sbjct 4241809 AT--ATATATAAT----ATATTTATATATATATATTTATATATAATATATATTATAAATA 4241756 Query 204352 ttcataaaaattatatccc-ta-ataatactatattata-------taNAGATTATACG- 204401 || ||||| ||||||| | || |||||| ||||||||| || | |||||| Sbjct 4241755 TT-ATAAATATTATATACTATATATAATA-TATATTATAAATATTATAAATATTATATAC 4241698 Query 204402 TGTATTAAAACTATGAA-ATTGAAATCAAAGTTAATATCATATATTTATAATTATAACTT 204460 | ||| | ||||| || ||| || | | ||||| ||||||||||| |||| | Sbjct 4241697 TATATATATACTATAAATATTATAAATATTATAAATATATTATATTTATAAATATA---T 4241641 Query 204461 TGATAGTTTAAACGAAAGTATATATTTATTTTAACATGTTCAATGACAGTAAAATAATTT 204520 | ||| |||| | || || |||| ||| || | || || | | | | ||||||| Sbjct 4241640 TTATA-TTTATA-TAATATAAATATATATATTTATATTTTTATTTTTATATATATAATTT 4241583 Query 204521 TATAT 204525 ||||| Sbjct 4241582 TATAT 4241578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904566024546600