Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_021326.1 Length=45242 Score E Sequences producing significant alignments: (Bits) Value seq449 196 1e-45 >seq449 Length=32345 Score = 196 bits (216), Expect = 1e-45 Identities = 759/1165 (65%), Gaps = 47/1165 (4%) Strand=Plus/Minus Query 27111 TAAACTGCATATCTTAACGCATCTAATGTGTCATCGTTTAATTTAACTGGTTCGTCCGCA 27170 |||| |||||||||||| | ||||| | ||||| ||| ||| |||||||| | | Sbjct 9043 TAAATTGCATATCTTAATGAATCTAGTACATCATCATTTTGTTTTACTGGTTCTCCAGTT 8984 Query 27171 TTATCTTTCCAAACGTAGTTGTAGATTTCTTCTT-TAAATAAGCTAACTTTTTCTTTAAT 27229 | || |||||||| || || | |||||| || | | | || ||||||||||| Sbjct 8983 GTTTCATTCCAAACATATAGGTTAAATTCTTCAAGTATCTTATC-AATATTTTCTTTAAT 8925 Query 27230 AATGAACATTTTATTTAGCTTGAATAACCTAGAAATAACTTCAATGCCAGCAATAACAGC 27289 || || | || | | || || | | |||| ||||| || ||||| | || Sbjct 8924 AAAAAATAGCTTCCTCACTTTTAAAAGTTTGGAAACTACTTCTATACCAGCTAATACTTT 8865 Query 27290 TTTGTCAGCATATCTTGCTTTTAT--CTTCTCTCTTCTAAATCGTTCAATATGTTCAGGT 27347 ||| | ||||| | | ||| || |||||| || ||| || ||| ||| || ||| Sbjct 8864 TTTATTAGCATTTATACATTTAATACCTTCTCGATT--AAAACGAGCAACATGCTCTGGT 8807 Query 27348 CTAGCTGTATCACAATAAAAAAGAATATCGCCATGCCTTTTTATAACTCCTTTAGCAATA 27407 || |||| ||| | |||| |||||| |||| | | ||||| ||||||| | Sbjct 8806 CTTGCTGAATCTGCAAAAAATTGAATATTACCATACTTAGATATAAAATCTTTAGCTACT 8747 Query 27408 GCTACCCAGTCATCTATTTCTTTGTGTCTGTGTGCGTGTTCTTCAATAACGTACTTGTTT 27467 ||||||| |||||||||||| | | | || ||||||||||| | || | || Sbjct 8746 TTAACCCAGTAATCTATTTCTTTATATTGCTTTGTATGTTCTTCAATCATATAGATATTA 8687 Query 27468 CCGTCGAAGTC--TTCCGCTACAACCATAATAGAACCATAATGCTCATATCCCCAGTCGA 27525 || || ||||| | || | || || || | |||| ||| |||||||| | Sbjct 8686 TGATCTGTATCCATTCCG--AAAATAGTTATTGAGCCTTTGTGCTGATAACCCCAGTCCA 8629 Query 27526 CGCCTGC-----ATAttt-cctttttatttgtttagttttaaattcttc--ttctttgat 27577 | || | || || || |||||| | ||| | || ||| || | || Sbjct 8628 CTCCACCCCAAAATCTTAACCATTTTATATCTTTTGGAATAGATTGAAGAGTTATCACAT 8569 Query 27578 gtaatgaactttttctttgaaatctttATATACAACACCTTCAGCAGAAACCCACTTACC 27637 || | | || | || ||||||||||| ||||| || || | || ||||| || || Sbjct 8568 GT---GTATTTATA--TTAAAATCTTTATACACAACTCCCTCGGGTGATACCCATTTTCC 8514 Query 27638 ATAAATATCACGATCTGTGAACATTCCTGTTGGTGT---ACTTGCGATAATCGATTCAAT 27694 | ||||| | ||| ||||||||| | || || | || | ||| || |||| Sbjct 8513 AAGAATATTTCTATCAAAAAACATTCCTATCGGAGTTGCATTTTCTATACTC---TCAAC 8457 Query 27695 ATATTCTTCATCTAAAAATGTATTGTCAAACAAAGTAAATTGGAATGCTTTGATATTTAG 27754 |||||||||||||||||| |||| ||| |||||||||| || ||||||| ||||||| Sbjct 8456 ATATTCTTCATCTAAAAAATTATTATCATACAAAGTAAAATGAAATGCTTGTATATTTAA 8397 Query 27755 TCTTCCATTCGATAACC--GTTGACCACTCTTATCAATGTAATCCTTTTTAACCGGATGC 27812 ||||||| || | ||| || ||||| | ||||| ||||||| ||| Sbjct 8396 CTTTCCATTTTTAAATCTAGTT--CCTGATTTATCTACATAATCAGTTTTAACAAAATGG 8339 Query 27813 ATTGGGTTTTCGGGGTTGGTATCAATTAGTATCCTCGCGCCTTTGTAACT--ACAACGCG 27870 | || || || ||||| ||||| || || || || || | || ||| | || Sbjct 8338 CTAGGATTATCAGGGTTAGTATCCATATAAATAACTGCTCC--TGCATCTGAACATCTCG 8281 Query 27871 AGAATAC-TTCTTTAATAAACATATTGTGTAATGCTGTTCCCTCGTTTAAAAAAGCACCT 27929 ||||| |||||||| ||| |||| |||||||||||| | || || | || || ||| Sbjct 8280 -CAATACATTCTTTAACAAAAGTATTATGTAATGCTGTTGCTTCATTAAGTAATGCTCCT 8222 Query 27930 GCTGAAGTAAAACCACGCGCTTTTTTCCATGCATCCGAGTTTTGACCGTCGAATACATAC 27989 | | ||| || || | || |||||||| | | || | || | |||||||| Sbjct 8221 GTAGCAGTGAATCCTCTTACTGCTTTCCATGAAGAGGCATTATCTCCACCAAATACATAA 8162 Query 27990 ACTTTATTACCAAATATTTTGACTGCGTTAGATTTATCAAGTGTTAACTCT-CTACCTAG 28048 | ||||| || |||| | | ||| ||||| |||| |||| | | | | || Sbjct 8161 ATCTTATTCCCGAATAAATCAAAACTATTATCTTTATGAAGT-TTAATTTTAATGCTTAA 8103 Query 28049 TATTAACTCCATATCATCTAGTATGTTACGTCTTATAGATGCTTGTGTTGCTCCTCCAAT 28108 | | |||| ||||| || ||| || | | |||| || | |||||||| || || Sbjct 8102 GAGTGTCTCCCAATCATTTAATATATTTCTCCATATATTCGCATAAGTTGCTCCACCGAT 8043 Query 28109 AATGAAGTTAAGCCCCTTGTCTTTATAAGTAGCTATGTGCATTaaaaaaaGCA--GGATA 28166 ||| || || | ||| ||| |||||||||| | ||||||||| |||| Sbjct 8042 AATAAAATTTTTATTTTGACCTTCATATTTAGCTATGTG-AGATAAAAAAGCAATAGATA 7984 Query 28167 AATACATACGTTTTACCTGCCCTCTTCGCACCACTCGC-TATTAATACTTTAGGTCTATC 28225 || ||||| ||||| || || ||| | || ||| | || ||||||| || || | || Sbjct 7983 AA-ACATAAGTTTTCCCAGCTCTCATTGCTCCA-TAGCAAATTAATATCTTCGGCTTTTC 7926 Query 28226 ATTTATAAAGCAGTTCCAGACTTCT 28250 || ||| ||| || | |||||| Sbjct 7925 TCTTCTAATGCAATTTAATACTTCT 7901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144566264807496