Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq51 86.0 5e-12 >seq51 Length=18513618 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || || |||||||| ||||| ||| | || |||| | | Sbjct 16773829 ATGCAGATCTTCGTGAAGACCTTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 16773770 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || ||||| ||| | ||| || ||| Sbjct 16773769 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 16773710 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | || | ||| || ||||||||||| || | || || | ||||||||| Sbjct 16773709 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 16773650 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| || ||||| |||| || | ||| | ||||| Sbjct 16773649 ATCCAGAAGGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGGGGGGG 16773603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398631901735753