Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 3e-11 >seq21 Length=29197815 Score = 84.2 bits (92), Expect = 3e-11 Identities = 263/380 (69%), Gaps = 47/380 (12%) Strand=Plus/Minus Query 107151 AAATATATAAATATCTGAATAAAGTATTTCCTTATTATTATTCAATACTATTTTTAATTT 107210 |||||||||||||| |||| ||| |||| |||| |||| ||| || ||| | Sbjct 9404522 AAATATATAAATAT----ATAA--TAT----TTAT--ATATTTAATA-TATATTAAATAT 9404476 Query 107211 GGGATTATA-ACTAGTtatatcatataattgtata-tcatatttttcaacattaataatg 107268 | |||| | || |||||| |||||| | |||| | |||| | | || || ||||| Sbjct 9404475 ATAAATATATAATATTTATAT-ATATAAATATATATTTATATATATAAATATATATAATA 9404417 Query 107269 t-tatgtctatatattgatatatgtaaatttttatctaatattagtatttcattata-at 107326 | ||| |||||||| | |||| |||| | ||| ||||| ||| | | |||| || Sbjct 9404416 TATATAAATATATATT-AAATATATAAA--TATATATAATA----TATATAAATATATAT 9404364 Query 107327 taaatatatttttgtataatattggctgta-atttattaaatattaaat-tatcatctat 107384 ||||||||| | ||||||||| | || ||||| || ||||||||| ||| | ||| Sbjct 9404363 TAAATATATAAATATATAATATT---TATATATTTAATATATATTAAATATAT-AAATAT 9404308 Query 107385 ttCTAAGGTATCATCTTTGatataataaattatataaagtattaattcatttctcattcg 107444 | | ||| || ||| ||||| | ||||||| | ||| || |||| | | Sbjct 9404307 TATATATTTAT-ATATTTAATATA--TATTTATATATATTAT--ATATATTTATATATTT 9404253 Query 107445 aatat-tattaataatatttaaatatatagattctggcatataatctttatgtgataata 107503 ||||| ||||| ||||| |||||||||| | | | |||||| | ||| | | |||| Sbjct 9404252 AATATATATTA--AATATATAAATATATATAATAT---ATATAA-ATATATATTA-AATA 9404200 Query 107504 tacatctaatatatgatata 107523 || | ||||||| ||||| Sbjct 9404199 TATA---AATATATAATATA 9404183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785671341190840