Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=84051066 Score = 86.0 bits (94), Expect = 6e-12 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || || ||| | ||| |||| || |||| ||||| |||| Sbjct 77296032 AGCATATGGGGACCAACGTGTGACGGCCTTGATCGCATCGTCGAGCGCTGTGACTTGCCC 77296091 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | || |||||||| ||| | | |||||||||||||| ||||||| || | || Sbjct 77296092 GAGATGCACGTGGGCGATTGGATGCTTTTTGAAAACATGGGTGCTTACA-CTGTTGCTGC 77296150 Query 21245 T-CTTCAACCTTTAACGGCTTCCCAAAGCCA 21274 | |||| || || ||||| |||| | |||| Sbjct 77296151 TGCTTCTACTTTCAACGGGTTCCAGAGGCCA 77296181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463253699541360