Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq53 87.8 4e-12 >seq53 Length=17124947 Score = 87.8 bits (96), Expect = 4e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 131857 AAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTAT 131916 |||| | || |||||||| ||| ||||| || ||||| || || |||| |||||| Sbjct 11545951 AAGAGTGGTGGCTTTTGCAGCTGTAGAAGGGATTTTCTTCTCGGGATCTTTTGCTGCTAT 11546010 Query 131917 CTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTC 131976 || ||||| ||||| | || | |||||||||||| | || |||||| || ||||| Sbjct 11546011 ATTCTGGCTGAAGAAAAGAGGTCTTATGCCTGGACTCACTTTTTCCAATGAACTCATCAG 11546070 Query 131977 GAGAGATGAAG 131987 |||||||||| Sbjct 11546071 CAGAGATGAAG 11546081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186046765373297