Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 1e-13 seq62 82.4 7e-11 >seq18 Length=30197870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| || ||||| | |||||||||||||||||| || ||||| || ||||| ||| Sbjct 1319348 TACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCCAGGTTCTGCTGGTTG 1319407 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 || |||||||| || | |||||| ||||||||||||| Sbjct 1319408 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 1319445 >seq62 Length=14533578 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||| ||| | | |||||||| || |||||||| || | || || |||||| Sbjct 3816338 AACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTC 3816279 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | | |||| || | ||| || || ||||| |||||||||||||| Sbjct 3816278 CAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCTTG 3816219 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || |||| | ||| | || || | |||||||| || | || | || || Sbjct 3816218 GATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 3816159 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||| || || | ||| |||||||| Sbjct 3816158 GCCGGTCAGGGTCTTCACGAAGATCTGCAT 3816129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476311071969720