Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 8e-11 >seq1 Length=84051066 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/122 (76%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 59991 GCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCT 60049 || ||||| ||| ||||||||||||||||| ||||| || ||| | || |||||||| Sbjct 77630959 GCCTTTGC-TGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTCGCGTCGATATTCTGGCT 77630901 Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGA 60109 ||| || || ||||| ||||| ||||| | || ||||| || || ||| | | || || Sbjct 77630900 CAAGAAACGCGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATGA 77630841 Query 60110 GG 60111 || Sbjct 77630840 GG 77630839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548179387076880