Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_028982.1 Length=137918 Score E Sequences producing significant alignments: (Bits) Value seq449 105 6e-18 >seq449 Length=32345 Score = 105 bits (116), Expect = 6e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 92769 GAAGGAGGTAACTAATATGGGTTATGGAACTGCATTTGAAGAGGTTAAAACAGGTAAGGG 92828 || |||||||| | ||| || |||| ||||| || || ||||||| |||||| || Sbjct 11300 GATGGAGGTAAGAATAATGAATTTTGGATTAGCATTAGAGGAAGTTAAAAAAGGTAAAGG 11359 Query 92829 CATGCGCCTACCTAACTGGTCACCAGAAGTAGTTATTCGAGCACAGTTTCCAGATGAGCA 92888 ||| | |||| | ||| |||||| ||| |||||||||||||||| || | Sbjct 11360 AATGAGATTACCACAATGGAGTAAAGAAGTTAATATAAGAGCACAGTTTCCAGACGAATA 11419 Query 92889 TAGTAAGATGACTGCACCTTACTTATATGTAGAATCTCGCTTTGGTAGAGTACCTTGGAA 92948 | || |||||||||||||| |||||||| ||||| | ||||| | || |||||||| Sbjct 11420 TTCAAAAATGACTGCACCTTATTTATATGTTGAATCAAGATTTGGATGTGTTCCTTGGAA 11479 Query 92949 AGAGAC 92954 || || Sbjct 11480 GGAAAC 11485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440931764799760