Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20pardus_20[refseq_20GCF_5F001857705.1_202016-11-16] 50,377 sequences; 2,578,019,207 total letters Query= NC_029078.1 Length=34997 Score E Sequences producing significant alignments: (Bits) Value seq2721 104 5e-18 >seq2721 Length=1966 Score = 104 bits (114), Expect = 5e-18 Identities = 94/116 (81%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 9472 TAAACGAATTT-CTTTAAGGATTATCTTTACCTGTTTTTTAAATTCTTTAGCAATAGGCT 9530 ||| | ||||| |||||| ||| |||| || | ||||||||||| ||| || ||||| | Sbjct 1253 TAATCTAATTTGCTTTAAT-ATTTTCTTAACTTCTTTTTTAAATTGTTTTGCTATAGGTT 1195 Query 9531 TTCGAGATTGCATCAATACTTCATATAGGCCATCTTCCGTTAAAAACCACATTTCT 9586 ||| | |||||| ||||||||||| || |||||||| ||||||||||| ||||| Sbjct 1194 TTCTACTTTGCATTAATACTTCATAAAGTCCATCTTCTGTTAAAAACCAAGTTTCT 1139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111801877077366