Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq694 147 2e-30
>seq694
Length=2958536
Score = 147 bits (162), Expect = 2e-30
Identities = 321/473 (68%), Gaps = 7/473 (1%)
Strand=Plus/Plus
Query 18870 CAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGA 18929
|||||| | || || ||||||| || || || ||||| ||||| ||| || | ||
Sbjct 59820 CAAGGAGTAGACCAACTGCAAAAGGTGATTGACACAATCAAAACCAACTGTGATGACAGA 59879
Query 18930 CGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGT 18989
|||| || | | ||||||||||| ||| | || ||||||| || |||| ||
Sbjct 59880 AGAATCATCCTGTGTGGGTGGAATCCAAAAGATCTTCCTTTAATGG--CT-CCTCTCTGC 59936
Query 18990 CACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGA 19049
|| | | || ||||| ||| | | ||| ||||| | |||||||| |||||| |||
Sbjct 59937 CATTCCCTTTGCCAGTTCTACCTGGAAAATGGTGAGCTGTCCTGCCAGCTATACCGGAGC 59996
Query 19050 TCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTAC 19109
|| || || |||||||| | || || | ||| | | | ||||| || || ||||||
Sbjct 59997 TCAGGAGACATGGGCCTGGTTGTGCCCTCCAATGTCACCAGCTATGCCCTGCTCACCTAC 60056
Query 19110 ATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCA 19169
| | | || ||||| || || || | || || || ||||| |||| ||||||
Sbjct 60057 AGGATGGTACACACCACAGGCCTGAAGCCCAGTGACTTCATACATACTTTGGGAGATGCA 60116
Query 19170 CATATTTACTTGAATCATATAGATGCT-TTAAAAGTGCAGCTAGCTCGATCCCCAAAACC 19228
||||||||| ||| |||| | || ||| | ||| ||||||| || |||| ||
Sbjct 60117 CATATTTACCTGAGTCATGTTGA-GCTGCTGAAAATGCAGCTTCAGTGAGAACCAAGGCC 60175
Query 19229 TTTTCCTTGCCTTAAAATTATTCGAAATGTAACAGA-TATAAACGACTTTAAATGGGACG 19287
||| || ||||| || || |||| || ||| || | ||||| || | |
Sbjct 60176 TTTCCCGAAGCTTAAGATCCTTTGAAAAGT-TGAGACAATTGATGACTTCAAGGTTAAAG 60234
Query 19288 ATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAATGGAAATGGCT 19340
| |||||| |||| || || ||||| |||| | |||||||||||||||||
Sbjct 60235 ACTTTCAGGTTGAGGGGTACAATCCTCACCATACTATAAAAATGGAAATGGCT 60287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399496798815555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |