Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq702 264 1e-65
seq727 215 6e-51
seq1373 150 2e-31
seq536 122 1e-22
>seq702
Length=8706000
Score = 264 bits (292), Expect = 1e-65
Identities = 265/343 (77%), Gaps = 1/343 (0%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
|||||||| |||||||| ||||| | | | | ||| | ||||| ||||||||||||||
Sbjct 7443500 AGCAGGGCTTCGATGTCAGGCTCAATGTCGATGGTTGGAAAGCGGCGGCTGTACCTGCGC 7443559
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|| ||| || || | ||||||| ||||||||| ||||||||||| |||||||||||
Sbjct 7443560 ACAGGCACACCATCTGGGCCCACCAGGAACTTCTCAAAGTTCCAGGCGACGTCGTTGCGA 7443619
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
|||||||||||||||| |||| || ||||| ||| ||||| | |||||| ||
Sbjct 7443620 CACACTGGAGACCAGGTGATGAACTTCGGGTCAGTCATGAGCGCAGTGGCGTCGTCACTG 7443679
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
|| || ||||| |||| || |||||||||||||| || || ||| || || || |||
Sbjct 7443680 GGGGCAGGCAGAGCCTGGCGCAGGAAGGCGAAGAGGGGGTGCGCCTGCGCGCCATTTACC 7443739
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
||||||||||| || ||| | ||||| |||||||| ||| ||||| ||||||| |||
Sbjct 7443740 TCGCACTTCTCAAAAAGCGTGAAGTTGGGCTCGAACCCGCCGCCAGGTCGGACGTACTTA 7443799
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG-GTGA 83398
|||||| || |||||| | || | ||||| ||||| ||||
Sbjct 7443800 AGGGAATTCAGGATCTCTTCGTTTTTAGCGTTCTCCTGCGTGA 7443842
>seq727
Length=5185825
Score = 215 bits (238), Expect = 6e-51
Identities = 332/467 (71%), Gaps = 14/467 (3%)
Strand=Plus/Minus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
|||||||| |||||||| |||| || | | ||| | ||| | ||||| |||||||
Sbjct 1380324 AGCAGGGCTTCGATGTCAGGCTTCATGTTGATGGTTAGAAAGCAGCAGCTGTCCCTGCGC 1380265
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
| ||| || || | || |||| ||||||||||| |||||||| |||||| || ||
Sbjct 1380264 ATAGGCACACCATCTGGGCCTACCAGGAACTTCTCGAGGTTCCAGGTGACGTCGGTG-GG 1380206
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
|||||||||||||||| |||| || ||||| | || | || | |||||| |||
Sbjct 1380205 CACACTGGAGACCAGGTGATGAACTTGGGGTGGGTCGTGCACGCAGTGGCGTCGTCACTA 1380146
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
|| || ||||| |||| || ||||||||||||| || || ||| || | ||| ||
Sbjct 1380145 GGGGCAGGCAGAGCCTACCGCAGGAAGGCGAAGAAGGGGTGCGCCTGCGCGCTGTTCCCC 1380086
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTT---CCCA---GGACGGACG 83350
| ||||||||| ||| | ||||| |||||||| | | | ||| | ||| |
Sbjct 1380085 TGGCACTTCTC----AGCGTGAAGTTGGGCTCGAACCAGCTACGGCCACTGAGTGGGAAG 1380030
Query 83351 TGCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTA 83410
| | |||||||| |||||| |||| ||| || ||||| || ||| ||| ||
Sbjct 1380029 TAC-TCAGGGAATTTCGGATCTCTTTGTTCTTGGCATTCTCCTGATGCACGATCTGCTTG 1379971
Query 83411 CACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATC 83470
|| | ||| | ||||| | ||| || | || || ||| || || ||||||||||||||
Sbjct 1379970 CAAGAGAAGCGGAGCACCA-CAGGCCTGGGGC-CCGAGGTGCGGCGGCAGCTCGTTCATC 1379913
Query 83471 TGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTC 83517
|| | ||| |||| ||| || | |||||||| |||| ||||||||
Sbjct 1379912 TGGGCGTAGTCCCTGACGGTTGTGCCTCAGAGCAACGCCACGTTCTC 1379866
>seq1373
Length=18420737
Score = 150 bits (166), Expect = 2e-31
Identities = 298/430 (69%), Gaps = 17/430 (4%)
Strand=Plus/Plus
Query 83142 AGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCT 83201
|||||||||| |||||||||| || || || | ||||||||| |||||| |||| ||
Sbjct 3640510 AGAACTTCTCCAAGTTCCAGGTGACATCATTACATCACACTGGAAACCAGGTGATGAACT 3640569
Query 83202 GGGGGTCGCTCACGAGC-GTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGG 83260
|||| | ||| |||| ||| ||| | | || || ||||| || |||||| |||||
Sbjct 3640570 TGGGGCTGGTCATGAGCAGTGG-CAT--CATTACTGGGGGCCGGAAGAGCCTCTTGTAGG 3640626
Query 83261 AAGGCGAAGAGCGGATGTGCCCTTG--CACCGTTGACCTCGCACTTCTCGAAGAGCATAA 83318
||| |||||| || ||||||||| |||| | ||||||||||||| | ||||| |
Sbjct 3640627 AAGTTGAAGAGGGG--GTGCCCTTGTGCACCACTCTCCTCGCACTTCTCAGAAAGCATGA 3640684
Query 83319 AGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCAT 83378
| || |||||||| | |||| ||| | || | ||| | |||| || |||||| | |
Sbjct 3640685 ATTTGGGCTCGAACCTGTTCTGAGGTCTGAGGAACTTGAAGGAATTCAGGATCTCTTCCT 3640744
Query 83379 TCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCC 83438
|| ||| ||||||| || | | || || || ||||| | || ||||| ||||
Sbjct 3640745 TCCTGGC-ATTTCCTGATGCCAGCACCACTTGCATGGGAAGCAAATATTGACCAGGCCCC 3640803
Query 83439 GAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTC 83498
| | ||| || |||| ||| || |||| | || ||| ||| || ||||||
Sbjct 3640804 TGG--CAGAGGTGCTGCTGATGCTTGT---TCTGGGCATAGTCCTGGATAGTTGTACCTC 3640858
Query 83499 AGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAG 83558
||| ||| || | || | | | |||| | | ||| | ||| || | ||||||||
Sbjct 3640859 GGAGCGACACTGCATTTTTGGTCAGCAGCATATTGGCCCCCAGGAA-CCCAGGCTCACAG 3640917
Query 83559 GTTCTCCTCC 83568
| |||||||
Sbjct 3640918 G--CTCCTCC 3640925
>seq536
Length=25944906
Score = 122 bits (134), Expect = 1e-22
Identities = 192/267 (72%), Gaps = 6/267 (2%)
Strand=Plus/Plus
Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468
||| ||||||| || |||| | ||| || ||| ||| ||||||||| ||| |||
Sbjct 25657196 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCGCGCCTGC 25657254
Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528
| ||| || | || || |||||||| || |||||||||| || ||| | |||||||
Sbjct 25657255 TGGTGCACCTCTTCCCCGAGCTCTTCACGCACGAGAACCTGCGCAAGCAGTACAACTGCA 25657314
Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587
|||||| |||||||| |||| || |||||| ||| | | |||| |||||
Sbjct 25657315 GCGGCTCGCTGGGCAAGAAGCAG-CTGGACCCGTCGCGCATCAAGCTCATCCGCCACTAC 25657373
Query 50588 GTGCAGTTGCTGCACCCG-GCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGC 50646
|||||| |||| |||| ||| | | ||||| |||||||||| ||||| |||
Sbjct 25657374 GTGCAGCTGCTCTACCCCCGCGCCAAG-AACGACCGCGTGTGGACGCTGGAGTTCGTGGG 25657432
Query 50647 GTGCCTGGACGAGCGCTGCCGGCGCCG 50673
|||||||||||||||||||||||
Sbjct 25657433 CAAGCTGGACGAGCGCTGCCGGCGCCG 25657459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608785544869160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |