Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq747 100 5e-16
>seq747
Length=14734251
Score = 100 bits (110), Expect = 5e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960
|||| ||||| | |||| |||||| | || || ||||| || |||||||| || || |||
Sbjct 10993016 TGGTGGTACTTTGTATCTAAAGGGGTTGAGTATTTGGACACCGTATTTTTTATCCTGAGG 10992957
Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020
|| ||| || || || ||| || || ||||||||||| | ||| |||||||| ||
Sbjct 10992956 AAGAAAAACAACCAAGTCTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACACTG 10992897
Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
| ||||| || ||||| ||| | || || || ||
Sbjct 10992896 TGGTGGATTGGAATTAAGTGGGTCGCCGGGGGACA 10992862
Score = 91.5 bits (100), Expect = 3e-13
Identities = 102/133 (77%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||||| ||||| || |||||||| ||||||||| | || || ||
Sbjct 10991802 GCATTTTTTGGAGCACAGCTGAATTCCTTCATCCATGTGATTATGTACTCATACTACGGG 10991743
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || | ||| || ||| |||||||| ||||| ||||||||| | || | || |
Sbjct 10991742 TTAACTGCATTTGG-CCCATGGATTCAGAAA-TATCTTTGGTGGAAAAGATACTTGACCA 10991685
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 10991684 TGTTGCAGCTGGT 10991672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923179732399160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |