Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq485 107 2e-18
seq1344 84.2 2e-11
>seq485
Length=11789088
Score = 107 bits (118), Expect = 2e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 15887 TAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTTTT 15946
|||||||| ||| || | || ||||||||| | | | || |||||||| | |
Sbjct 134119 TAAAAATCTGCATCCAGGGTGAAGACATTATCTGTAGTTTCTGCCATAACTGCAAAACGT 134178
Query 15947 TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCC 16006
||||| || ||||| || ||||||||||||||||| ||||| || ||||| ||||||
Sbjct 134179 TGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCCAAAGAAATGTTTTCC 134238
Query 16007 ATAAAATCAAAAGGATTTTTTG 16028
||||||||||| ||||||| ||
Sbjct 134239 ATAAAATCAAAGGGATTTTCTG 134260
>seq1344
Length=6361600
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
|| || || || || | || || ||||| || || || ||||| || || ||||| ||
Sbjct 6043429 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 6043370
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| ||||| | || || |||||||||||||| || ||||| ||||| ||||| ||
Sbjct 6043369 AGCCAGAATATCGACGCGAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCC 6043310
Query 16379 ACCAATCGCTCACC 16392
|| | ||||| ||
Sbjct 6043309 ACAACCCGCTCTCC 6043296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462503449309400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |