Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq623 1597 0.0
seq533 583 6e-162
seq517 187 2e-42
>seq623
Length=19124984
Score = 1597 bits (1770), Expect = 0.0
Identities = 1354/1671 (81%), Gaps = 63/1671 (4%)
Strand=Plus/Plus
Query 107140 TCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCATCAC 107199
|| ||||| || ||| ||||||| |||||||||| ||| || ||| ||| |||||||
Sbjct 2678633 TCGTAGGCCGGTCTTTACTGAGGTTATTTGTCTAGTAAAGGAATGTATTTTTGCCATCAC 2678692
Query 107200 TCTGGAGTTGAACTT--GATGTTCT--------------GGATTAGTTTGTAATTAAAGG 107243
| |||||||| |||| ||||||| || ||||| ||||||| ||||
Sbjct 2678693 TTTGGAGTTGCACTTTTGATGTTCCTGTGAATACATGCAGGGTTAGTGTGTAATTGAAGG 2678752
Query 107244 CATTTTGTTCTGTCCAAGGATC---TCCTCCTCCACCTTGCCTGTGCCCAAACTCTCCTG 107300
||||||||||||||||||||| ||||||||| || | | |||||||||||||| |||
Sbjct 2678753 CATTTTGTTCTGTCCAAGGATTCCATCCTCCTCCTCCGTCCTTGTGCCCAAACTCTACTG 2678812
Query 107301 ATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTG 107360
| || ||| || ||| |||| | |||||||||||| | || | | | | | |||
Sbjct 2678813 GTTTCTCATTCCGTGAGGATGATTTGGTGGAAGAAGATACAGTGGCAGCAGCGTTACCTG 2678872
Query 107361 TGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTT 107420
|||||||||||||||||||||||||||||| ||||| ||||||| |||| ||||| ||
Sbjct 2678873 TGGGCCCTGGGCTGCTATATGCTGCTGGCCATTGTTGCTCTGAGGCTTTGTCTCAGATTG 2678932
Query 107421 AAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGG 107480
|||||||| | |||||| |||||||| ||||||| || || ||||| | |||||||||
Sbjct 2678933 AAATGTGACTTTGATTCCCTGGATCTGAAGTCCAGAGATTTTCAGAGCCGGCACTGTAGA 2678992
Query 107481 GACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATC 107540
||||| |||||||| |||||| |||||||||||||||||||||||||||||| |||||
Sbjct 2678993 GACATCTTGTACAAGTCCCTGAAACTGCCAGCAAAGAGATCCATCAACTGTTCTCGGATC 2679052
Query 107541 ACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAA 107600
| | |||||||||| | |||||| | |||| | || ||||| ||||| | |||||
Sbjct 2679053 ATCCAAGGGGACCAGCAGGCAGTGATTGAGGCTGTGCTGGACAATCTGGAGATCAAGAAC 2679112
Query 107601 AAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTC 107660
|||||| |||| |||| | ||| | ||||| ||||| |||||||||||||||| |||
Sbjct 2679113 AAGCGGAAGCCTTTCACAGACACTGACTACCTTAACATGACCAGAGACTGTGAGCACTTT 2679172
Query 107661 AAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATT 107720
||||| ||||||||||||||| |||||| ||||| |||||||| |||||||||| |||
Sbjct 2679173 AAGGCTGAAAGGAAGTTCATACGGTTCCCTCTGAGCCAAGAAGAGTTAGACTTCCCTATT 2679232
Query 107721 GCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTG 107780
|||||||| ||||||||||||||||| || |||||||||||| | |||| ||||| |||
Sbjct 2679233 GCCTACTCAATGGTGGTCCATGAGAAAATAGAAAACTTTGAAAGATTGCTCCGAGCTGTG 2679292
Query 107781 TATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAA 107840
||||||||||||||||||||||| |||||||||||| ||| |||||||| |||||||||
Sbjct 2679293 TATGCCCCTCAGAACATATACTGCATCCACGTGGATGAGAAATCCCCAGAAACTTTCAAA 2679352
Query 107841 GAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTC 107900
||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2679353 GAGGCAGTCAAGGCAATTATTTCATGCTTCCCAAATGTCTTCATGGCCAGTAAGTTGGTT 2679412
Query 107901 CCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTG 107960
| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 2679413 CGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCTGACCTGAACTGTATGGAAGACTTG 2679472
Query 107961 CTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATA 108020
||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| || |||
Sbjct 2679473 CTCCAGAGCCCAGTGCCATGGAAATACTTACTAAATACATGTGGGACAGACTTTCCTATA 2679532
Query 108021 AAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAG 108080
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 2679533 AAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGAACAGTATGGAG 2679592
Query 108081 TCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGAC 108140
|| || ||||| |||||| |||||| | |||||||||||| | ||||||| | ||||
Sbjct 2679593 TCAGAAATACCTACTGAGTACAAAAAGACTCGCTGGAAATATCACTATGAGACAAAAGAC 2679652
Query 108141 ACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACA 108200
||| |||| |||| |||||||||||| |||||||||||||| |||| |||||||||
Sbjct 2679653 ACATTGTATATAACCAACAAGATGAAGGATCCTCCCCCTGATAACATACCTATGTTCACA 2679712
Query 108201 GGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAA 108260
|||||||||||| |||| || || |||| |||||||| |||||||||||| ||||| ||
Sbjct 2679713 GGGAATGCCTATATTGTAGCTTCCCGAGACTTTGTCCGACATGTCTTAGAGAACCCCAAG 2679772
Query 108261 TCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCC 108320
|||| | |||| |||||||||| |||||||||||||||||||| || || || ||||||
Sbjct 2679773 TCCCGACAACTGATTGAATGGGTAAAAGACACCTATAGCCCCGATGAGCATCTATGGGCC 2679832
Query 108321 ACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATC 108380
|| ||||||||||| || ||||||||||||||| |||| |||| |||||| |||| ||
Sbjct 2679833 ACGCTTCAGCGTGCACCATGGATGCCTGGCTCTATTCCCTACCACTCCAAGTTTCACGTC 2679892
Query 108381 TCAGACATGAC-TGCCATCGCCAGG-------------------CTCGTCAAGTGGCAGT 108420
||||| ||| | ||||| ||||| || ||||||||||||
Sbjct 2679893 TCAGATATGGCAGGCCAT-TCCAGGCTGGGGGCATGGGGGGGGCCTGGTCAAGTGGCAGG 2679951
Query 108421 ACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGA 108480
||| |||||| | |||| |||||||| ||||||||||| |||||||||||||| | |
Sbjct 2679952 GCCATGAGGGAAACATCAGTATGGGGGCACCTTATGCACCTTGCTCTGGAATCCACCAGC 2680011
Query 108481 GGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCT 108540
|| | ||||| ||||| ||| | || |||||| | |||||||| || |||||||||||||
Sbjct 2680012 GGTCTATCTGTATTTATGGGACTGGAGACCTGCATTGGATTCTTCAAAACCATCACCTCT 2680071
Query 108541 TGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACC 108600
|||| |||||||||||||| | ||||||||| || || || ||||| ||||||||||||
Sbjct 2680072 TGGCCAACAAGTTTGACCCAAAGGTGGATGACAATGTTCTTCAGTGTTTAGAAGAGTACT 2680131
Query 108601 TACGTCATAAGGCCATCTATGGGACTGAACTTTGA-------------------GCTGCA 108641
||||||||||||||||||||||||||||||| ||| ||| |
Sbjct 2680132 TACGTCATAAGGCCATCTATGGGACTGAACTCTGACATAAACTATAAGAGGATTGCTAC- 2680190
Query 108642 CTGTGGGCCAGGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGG 108700
||||||| || | || |||| |||| | | | | |||| || |||||||||||
Sbjct 2680191 CTGTGGGGCAAGAACATGTGGATACATACTCCAGATGGGCTGGGACAATGTGGGGTGGGA 2680250
Query 108701 GACGAGGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCTTTG 108751
||| |||||| | |||| |||||||||| | || || |||||||| ||
Sbjct 2680251 GACCAGGGCTCTACAATCTGTGGCATCCCCAA--GTTAGGGGGCTGCTATG 2680299
>seq533
Length=14969682
Score = 583 bits (646), Expect = 6e-162
Identities = 538/681 (79%), Gaps = 25/681 (4%)
Strand=Plus/Minus
Query 108088 TACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGT 108147
||||| | |||| |||||| | |||||||||||| | || ||| | ||||||| | |
Sbjct 13568436 TACCTACCGAGTACAAAAAGACTCGCTGGAAATATCACT--GAGACAAAAGACACATTCT 13568379
Query 108148 ACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATG 108207
|| |||| |||||||||||| |||||||||||||| || | || |||||||||||||
Sbjct 13568378 ACGTAACCAACAAGATGAAGGATCCTCCCCCTGATAACATATCTATATTCACAGGGAATG 13568319
Query 108208 CCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAA 108267
||||| |||| || || |||| |||||||| |||||||||||| ||||| || |||| |
Sbjct 13568318 CCTATATTGTAGCTTCCCGAGACTTTGTCCGACATGTCTTAGAGAACCCCAAGTCCCGAC 13568259
Query 108268 GACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTC 108327
|||| |||||||||| |||||||||||||||||||| || || || |||||||| ||||
Sbjct 13568258 AACTGATTGAATGGGTAAAAGACACCTATAGCCCCGATGAGCATCTATGGGCCACGCTTC 13568199
Query 108328 AGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACA 108387
||||||| || ||||||||||||| | |||| |||| |||||| |||| ||||||| |
Sbjct 13568198 AGCGTGCACCATGGATGCCTGGCTGTATTCCCTACCACTCCAAGTTTCACGTCTCAGATA 13568139
Query 108388 TGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGG 108447
|| | ||||| |||||||| |||||||||||| ||| |||||| | |||| |||||||
Sbjct 13568138 TGGCAGCCATTGCCAGGCTGGTCAAGTGGCAGGGCCATGAGGGAAACATCAGTATGGGGG 13568079
Query 108448 CGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGG 108507
| ||||||||||| |||||||||||||| | | || | ||||| ||||| ||| | || |
Sbjct 13568078 CACCTTATGCACCTTGCTCTGGAATCCACCAGCGGTCTATCTGTATTTATGGGACTGGAG 13568019
Query 108508 ACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGG 108567
||||| | |||||||| || ||||||||||||||||| |||||||||||||| | |||||
Sbjct 13568018 ACCTGCATTGGATTCTTCAAAACCATCACCTCTTGGCCAACAAGTTTGACCCAAAGGTGG 13567959
Query 108568 ATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTG 108627
|||| || || || ||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 13567958 ATGACAATGTTCTTCAGTGTTTAGAAGAGTACTTACGTCATAAGGCCATCTATGGGACTG 13567899
Query 108628 AACTTTGA-------------------GCTGCACTGTGGGCCAGGGAC-TGTGCCAACAT 108667
|||| ||| ||| | ||||||| || | || |||| ||||
Sbjct 13567898 AACTCTGACATAAACTATAAGAGGATTGCTAC-CTGTGGGGCAAGAACATGTGGATACAT 13567840
Query 108668 GCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCATC 108727
| | | | |||| || ||||||||||| ||| |||||| || |||| |||||||
Sbjct 13567839 ACTCCAGATGGGCTGGGACAATGTGGGGTGGGAGACCAGGGCTCTGCAATCTGTGGCATC 13567780
Query 108728 CCCCAGGGTCAGAGGGCTGCT 108748
|| | || || ||||||||
Sbjct 13567779 CCTAA--GTTAGGGGGCTGCT 13567761
>seq517
Length=11963285
Score = 187 bits (206), Expect = 2e-42
Identities = 586/894 (66%), Gaps = 39/894 (4%)
Strand=Plus/Plus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || |||||||||||| ||| || |||||||| || || || ||||| ||| | ||
Sbjct 8483826 CCCCTTAGTAAAGAAGAGGCAGAGTTTCCCATTGCATATTCTATAGTGGTTCATCACAAA 8483885
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
|| |||| |||| |||| ||| | ||| | ||| |||||||| | ||||| |
Sbjct 8483886 ATCGAAATGCTTGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAATCTCTACTGCATT 8483945
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|||||||| || || || | || | ||||| | || ||| ||||||
Sbjct 8483946 CACGTGGACAGAAAATCAGAGGATTCCTTTTTGGCCGCGGTGATGGGCATCGCCTCCTGC 8484005
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
||| || |||||| |||||||| || ||| ||||| |||||||| ||| |
Sbjct 8484006 TTCAGTAACGTCTTCGTGGCCAGTCAGCTGGAGAGCGTGGTGTATGCCTCTTGGAGTCGG 8484065
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985
|| || || ||||| ||||| ||| ||||| | || || | ||||| |||| ||
Sbjct 8484066 GTTCAGGCCGACCTCAACTGCATGCAAGACCTCTACCGGA--TGAGTGCAGACTGGAGGT 8484123
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045
|||| | ||| ||||| | || ||||| || || ||||| ||||| |||| |
Sbjct 8484124 ACTTGATAAATCTTTGCGGCATGGATTTCCCTATTAAAACCAACCTGGAGATTGTCCGGA 8484183
Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA---CCTTCTGAGTCCa 108102
||||| ||| | ||| | ||||| | ||||| ||| | || || | |
Sbjct 8484184 AGCTCAAATCGTTAATGGGCGAAAACAGCCTAGAGTCCGAGAGAATGCCATCCAAT---A 8484240
Query 108103 aaaaaaaTCGCTGGAAATACCGCTATG-AGGTGACAGACACACTGTACCCT-ACCAGCAA 108160
||||| | | |||||| | | ||| || || | | | | || |||| ||
Sbjct 8484241 AAAAAGAAAGGTGGAAAAAGCATTATACAGTTGTTA-----ATGGAAAGCTGACCAACAC 8484295
Query 108161 GATGAAGGAC---------CCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTA 108211
| || |||| ||||| | ||| | ||| ||||| | || | ||||||
Sbjct 8484296 GGGGACGGACAAAATGCACCCTCCTCTTGAAACG---CCCCTGTTCTCGGGCAGTGCCTA 8484352
Query 108212 TTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAA-ATCCCAAAGAC 108270
||||||| | | | | ||| |||| |||| || || |||| |||
Sbjct 8484353 CTTTGTGGTCAGTAGGAAGTATGTGGGCTATGTGCTAGAGAATGAAAAGATCCAGAAGTT 8484412
Query 108271 TGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGC 108330
| | || |||| |||||||||||| || || || || | ||||||||||| | |||
Sbjct 8484413 TA-TGGAGTGGGCCAAAGACACCTACAGTCCAGATGAGTATCTCTGGGCCACTATCCAGA 8484471
Query 108331 GTGCTCCGTGGA-TGCCTGGCTC--TGTTCCTA-GCCACCCCAAGTATCACATCTCAGAC 108386
| | ||| | | | || ||||| ||| |||| |||| |||||| |||| || |||
Sbjct 8484472 G-GATCCCCGAAGTCCCAGGCTCACTGTCCCTAAGCCAG---AAGTATGACATGTCTGAC 8484527
Query 108387 ATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGG 108446
||| || ||||| ||| ||||||||||||||||| || || |||||| || ||||
Sbjct 8484528 ATGCACGCGATCGCGAGGTTCGTCAAGTGGCAGTACTTTGAAGGTGATGTCTCCAAGGGG 8484587
Query 108447 GCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGG 108506
|| || || |||||||| || |||| | | | | || | | ||| || ||
Sbjct 8484588 GCCCCCTACCCACCCTGCAGCGGGGTCCACGTGCGTTCTGTGTGTGTCTTCGGAGCAGGT 8484647
Query 108507 GACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560
||| || ||||||| || | || || ||| | || || |||||||||||| ||
Sbjct 8484648 GACTTGAACTGGATGCTACGAAAGCACCACTTGTTTGCCAACAAGTTTGACACG 8484701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348262522346046
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