Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq694 141 7e-29 >seq694 Length=2958536 Score = 141 bits (156), Expect = 7e-29 Identities = 382/580 (66%), Gaps = 22/580 (4%) Strand=Plus/Plus Query 20039 ATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTAT 20098 |||||||||| | | || || |||| ||||| | ||| || ||| | || ||||| Sbjct 59575 ATGAATTTCCTCTGCTGACAACCAAACCTGTATTCTAGAAGGGTGTTTTGGAGGAGTTGC 59634 Query 20099 TATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGG-AGTTAAGATT 20157 | |||||||| || ||||| ||||| || || |||| |||| ||| || || Sbjct 59635 TGTGGTTTATCAAGGGATCCACAAACGCTTGGGAA-TTGTCTTCCAAGGGAGTGAAAATC 59693 Query 20158 TGGAGCGCACATGGATC-TAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGA 20216 ||| | || |||| || | || | | || ||||| | ||| |||| | |||| Sbjct 59694 TGGGACTCAAATGGGTCCTGAG-ACCTCTTGGACAGCCG-GTATTCTGCAACAGAGAAGA 59751 Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276 ||||| || || || || ||| |||||||||| | ||| || Sbjct 59752 AGGGGACTTAGGCCCAGTTTATAATTTTCAATGGAAA--------------ATACAAAGA 59797 Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 | ||| || |||||| ||| ||||||||||| ||| | ||||| || ||| | ||| Sbjct 59798 TAAGAATTCAGATTATTCTGGTCAAGGAGTAGACCAACTGCAAAAGGTGATTGACACAAT 59857 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||||| ||| | ||||||||||| || | || | ||||| | |||||| | || Sbjct 59858 CAAAACCAACTGTGATGACAGAAGAATCATCCTGTGTGGGTGGAATCCAAAAGATCTTCC 59917 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATT 20456 |||||||||| |||| || ||| || ||||| || ||| | | ||| ||| | Sbjct 59918 TTTAATGGCT---CCTCTCTGCCATTCCCTTTGCCAGTTCTACCTGGAAAATGGTGAGCT 59974 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||| || || | || | | || | || ||||| |||| ||| || | |||| | | Sbjct 59975 GTCCTGCCAGCTATACCGGAGCTCAGGAGACATGGGCCTGGTTGTGCCCTCCAATGTCAC 60034 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 || ||||| ||||| || || | ||| | ||| |||| | || | ||||||| Sbjct 60035 CAGCTATGCCCTGCTCACCTACAGGATGGTACACACCACAGGCCTGAAGCCCAGTGACTT 60094 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCAT 20616 | || || | ||||| || ||||||||||| | |||| Sbjct 60095 CATACATACTTTGGGAGATGCACATATTTACCTGAGTCAT 60134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399176804583655