Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 98.7 1e-15
seq566 96.9 3e-15
>seq1153
Length=1501042
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || || || |||| | ||||| |||||||| ||
Sbjct 1169111 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTGCCG 1169052
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||||| | ||||| || || || ||||| ||||| || ||| || |||
Sbjct 1169051 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCCTGGATCTTCCCTTTG 1168992
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | |||||||| ||||| ||
Sbjct 1168991 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAAGGTC 1168932
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 1168931 TTCACGAAGATCTGCAT 1168915
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
|| |||| || | ||| | || ||||| || || ||||| || || || |||| |
Sbjct 1171017 AAGCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 1170958
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||||| |||||||| || ||| |||||| | ||||| || || || ||||| ||
Sbjct 1170957 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 1170898
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | ||||| ||||||||||||| | |||
Sbjct 1170897 TTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 1170838
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| |||||||| ||||| || || ||||| || |||||
Sbjct 1170837 ATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1170800
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
|| |||| || | ||| | || ||||| || || ||||| || || || |||| |
Sbjct 1169588 AAGCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 1169529
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||||| |||||||| || ||| |||||| | ||||| || || || ||||| ||
Sbjct 1169528 CCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 1169469
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | ||||| ||||||||||||| | |||
Sbjct 1169468 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 1169409
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| |||||||| |||| || || ||||| || |||||
Sbjct 1169408 ATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169371
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || || || |||| | ||||| |||||||| ||
Sbjct 1169339 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCG 1169280
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||||| | ||||| || || || ||||| || ||||| ||| || ||
Sbjct 1169279 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 1169220
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| ||||||||||||| | ||| | |||||||| |||| ||
Sbjct 1169219 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 1169160
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||| || |||||
Sbjct 1169159 TTCACGAAGATCTGCAT 1169143
>seq566
Length=2972453
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| |||||||| || ||||| ||||| | |||| || || ||||| || ||
Sbjct 801043 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCT 801102
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| || | ||||| || || || ||||||||||| || ||| || ||
Sbjct 801103 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 801162
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | ||| | ||||| ||||||||||||| | ||| | ||||||||||||| ||
Sbjct 801163 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 801222
Query 139748 TTTACGAATATTTGCATA 139765
|| ||||| || ||||||
Sbjct 801223 TTCACGAAGATCTGCATA 801240
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608
||||| || | ||| | || |||||||| || ||||| ||||| | ||||
Sbjct 801252 ACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCC 801311
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
|| || ||||| || || ||| |||| || | ||||| || || || ||||| || ||
Sbjct 801312 ATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTT 801371
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| || || | | ||| | ||||| ||||||||||||| | ||| |
Sbjct 801372 ATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 801431
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||||||||||| || || ||||| ||||||||
Sbjct 801432 GGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 801467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496054829016800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |