Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq485 102 7e-17
>seq485
Length=11789088
Score = 102 bits (112), Expect = 7e-17
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232
|||||||||| || || || || || ||||| || || || |||||||| |||| ||| |
Sbjct 143825 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 143884
Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292
| | ||| |||||||||||||| || || || || || || ||||| || |||||||| |
Sbjct 143885 TCAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATCCCTTCTACAGCTGCAAAAG 143944
Query 13293 C 13293
|
Sbjct 143945 C 143945
Score = 84.2 bits (92), Expect = 2e-11
Identities = 104/140 (74%), Gaps = 2/140 (1%)
Strand=Plus/Plus
Query 12803 TAAAAATCAATATCTAGAGAAAATACATCATC-GTCCTTATTTGACATAACAGACATTTT 12861
|||||||| ||| || | || |||| ||| || || | || |||||| | |
Sbjct 134119 TAAAAATCTGCATCCAGGGTGAAGACATTATCTGTAGTT-TCTGCCATAACTGCAAAACG 134177
Query 12862 TTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTC 12921
|||||| || ||||| ||| ||||| || |||||||| ||||| || ||||| |||||
Sbjct 134178 TTGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCCAAAGAAATGTTTTC 134237
Query 12922 CATAAAATCGAAAGGATTTT 12941
||||||||| || |||||||
Sbjct 134238 CATAAAATCAAAGGGATTTT 134257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430974631407558
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |