Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq1085 140 3e-28 >seq1085 Length=18888332 Score = 140 bits (154), Expect = 3e-28 Identities = 122/152 (80%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || ||||| || | || |||||||| |||||||||||||| ||||||||| Sbjct 2186641 GGTTACCTGGGTTGCCAAGCGTTGTCCGAGATGATCCAGTTTTACTTGGAGGAGGTGATG 2186582 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || || | | || ||||||||| ||||||| ||||| |||||||||||| Sbjct 2186581 CCCCAGGCTGAGAACGAGGACCCAGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAG 2186522 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || || || || || ||||||| ||||| Sbjct 2186521 CTGAAGACCCTCCGGCTGAGACTGCGGCGCTG 2186490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447742122214480