Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1085 113 4e-20 >seq1085 Length=18888332 Score = 113 bits (124), Expect = 4e-20 Identities = 113/144 (78%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| |||||||| ||||| ||| | || ||||| ||||| ||||| Sbjct 2186632 GGTTGCCAAGCGTTGTCCGAGATGATCCAGTTTTACTTGGAGGAGGTGATGCCCCAGGCT 2186573 Query 127231 GAAAATCACGGACCC-GACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGAC 127289 || || | |||||| ||||| ||| | ||||| || |||||||| |||||||||||||| Sbjct 2186572 GAGAACGA-GGACCCAGACATCAAACAGCACGTGAACTCCCTGGGAGAAAAGCTGAAGAC 2186514 Query 127290 ATTGAGACTTCGACTGCGTCGCTG 127313 | | || ||||||| ||||| Sbjct 2186513 CCTCCGGCTGAGACTGCGGCGCTG 2186490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430046648135048