Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_006146.1
Length=171096
Score E
Sequences producing significant alignments: (Bits) Value
seq1085 129 6e-25
>seq1085
Length=18888332
Score = 129 bits (142), Expect = 6e-25
Identities = 112/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199
|||| |||||||| || || || |||| || ||||||||||||||| ||||||| || |
Sbjct 2186643 AGGGTTACCTGGGTTGCCAAGCGTTGTCCGAGATGATCCAGTTTTACTTGGAGGAGGTGA 2186584
Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259
|||| |||||||| || ||||||| || |||| ||||||||||||| ||||| || |
Sbjct 2186583 TGCCCCAGGCTGAGAACGAGGACCCAGACATCAAACAGCACGTGAACTCCCTGGGAGAAA 2186524
Query 10260 ATCTAAAGACCCTAAGGCT 10278
| || |||||||| ||||
Sbjct 2186523 AGCTGAAGACCCTCCGGCT 2186505
Score = 95.1 bits (104), Expect = 1e-14
Identities = 72/85 (85%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418
|||| || || ||||| ||||||||||||||| |||| |||||||| || || ||||| |
Sbjct 2184336 AGCTCCAAGAGAAAGGTGTCTACAAAGCCATGGGTGAGTTTGACATCTTCATCAACTACA 2184277
Query 10419 TAGAAGCATACATGACCATGAAAAT 10443
||||||| |||||||| ||||| ||
Sbjct 2184276 TAGAAGCTTACATGACAATGAAGAT 2184252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547369080327040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |