Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq485 95.1 1e-14
seq1344 87.8 2e-12
>seq485
Length=11789088
Score = 95.1 bits (104), Expect = 1e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 21128 TAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTTT 21187
|||||||| ||||| | | ||| ||||||||| ||| || ||||| | | | |
Sbjct 134119 TAAAAATCTGCATCCAGGGTGAAGACATTATCTGTAGTTTCTGCCATAACTGCAAAACGT 134178
Query 21188 TGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCC 21247
||||| || ||||| ||| || || |||||||| || |||||||| || || ||||
Sbjct 134179 TGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCCAAAGAAATGTTTTCC 134238
Query 21248 ATAAAATCAAATGGATTTTC 21267
||||||||||| ||||||||
Sbjct 134239 ATAAAATCAAAGGGATTTTC 134258
>seq1344
Length=6361600
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186
||| || |||||||| || | ||| ||| ||| | ||||||| | |||||| |
Sbjct 6044941 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCCT 6044882
Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246
||||| || | ||||| || || || || || ||||| ||||||| ||| ||| ||
Sbjct 6044881 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 6044822
Query 21247 CATAAAATCAAATGGATTTTC 21267
|||||| ||||||||||||||
Sbjct 6044821 CATAAAGTCAAATGGATTTTC 6044801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531890966483960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |