Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq722 100 7e-16 >seq722 Length=1584642 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || |||| |||||||| || || || ||| Sbjct 1265054 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 1264995 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 || ||||||||||| || || || ||| |||||||||| |||| || | ||| | Sbjct 1264994 TTCTACAAAGATTCATGTAATCGGAAGAGCAACCAGCAGAACCTGGGAAAAATCAAATGC 1264935 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || || | || || ||| Sbjct 1264934 AGCAACCTGTGCACAGAAATAGTAGAGTATACC 1264902 Score = 98.7 bits (108), Expect = 3e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 ||||| |||||||| ||||| |||||| ||| || ||||||||||||||||| | Sbjct 1266605 GGGGCATTTGCTATTTATCTGGAGCCTTGGCATTTAGACATTTTTGAGTTTCTTGATTTA 1266546 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| || Sbjct 1266545 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGAGACCTTTTCTTTGCCCTTTGGATT 1266486 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984 | || | || ||||| || |||||| Sbjct 1266485 CCGGATCTCTTCATGAAACGAGTGGAG 1266459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303328901856578