Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 100 2e-16
>seq1153
Length=1501042
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| || || ||||||||||| || ||||||||||| | || ||| | ||
Sbjct 1169583 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1169524
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| |||||||| ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 1169523 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1169464
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 1169463 CTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1169404
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || || || || ||||||||
Sbjct 1169403 CTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169371
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||| | || ||| | ||
Sbjct 1169354 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1169295
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| ||||| || ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 1169294 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1169235
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 1169234 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1169175
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || || || || ||||||||
Sbjct 1169174 TTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169143
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||||| ||||||||||| || ||||||||||| | || ||| | ||
Sbjct 1169126 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1169067
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| |||||||| ||| | || | || ||| ||||| || | ||||||||| ||
Sbjct 1169066 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCC 1169007
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | || || | | | ||||| | ||||||| |||| |||||||||
Sbjct 1169006 TGGATCTTCCCTTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1168947
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||| || || || || ||||||||
Sbjct 1168946 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1168915
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| || || ||||||||||| || ||||||||||| | || ||| | ||
Sbjct 1171012 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1170953
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| ||||| || ||| | || | || ||| ||||| || | |||||| |||||
Sbjct 1170952 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1170893
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
|| | | ||| || | | | ||||| | ||||||| |||| |||||||||
Sbjct 1170892 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1170833
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||| || || || || ||||||||
Sbjct 1170832 CTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1170800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405080698162210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |