Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq615 95.1 2e-14 seq79 95.1 2e-14 seq596 91.5 3e-13 seq828 89.7 1e-12 seq273 89.7 1e-12 seq509 86.0 1e-11 >seq615 Length=1881975 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| Sbjct 1205006 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 1204947 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 1204946 TCCCGGCAGAGA 1204935 >seq79 Length=1666747 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 28377 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 28436 Query 142564 CCCACATCGGGC 142575 ||||| |||||| Sbjct 28437 CCCACGTCGGGC 28448 Score = 91.5 bits (100), Expect = 3e-13 Identities = 73/87 (84%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 142489 CCGGGTGGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTG 142548 |||| |||| || |||||| |||||||||||||||||| ||||||||||||| | Sbjct 32327 CCGGCAGGTGCCAT-GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG 32385 Query 142549 GTCGTGGGTTCGAGCCCCACATCGGGC 142575 |||||||||||||||||||| | |||| Sbjct 32386 GTCGTGGGTTCGAGCCCCACGTTGGGC 32412 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 21530 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 21471 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 21470 CCCACGTTGGGC 21459 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 41699 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 41758 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 41759 CCCACGTTGGGC 41770 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 49272 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 49331 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 49332 CCCACGTTGGGC 49343 >seq596 Length=4498854 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 419316 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 419257 Query 142564 CCCACATCGGGCAGAAGT 142581 ||||| | |||| |||| Sbjct 419256 CCCACGTTGGGCGCAAGT 419239 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 409256 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 409315 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 409316 CCCACGTTGGGC 409327 >seq828 Length=1306060 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 74341 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 74282 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 74281 CCCACGTTGGGC 74270 >seq273 Length=2693121 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1773869 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1773928 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1773929 CCCACGTTGGGC 1773940 >seq509 Length=6966902 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||| | |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4171858 GCCCAGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4171917 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4171918 CCCACGTTGGGC 4171929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027817322813839