Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 178 2e-39
seq566 158 2e-33
seq303 89.7 9e-13
seq890 84.2 4e-11
>seq1153
Length=1501042
Score = 178 bits (196), Expect = 2e-39
Identities = 170/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
||||| | |||| ||| || |||||||| || |||||||| || || || || || | |
Sbjct 1169360 AGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 1169301
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| | ||| |||||||| || || | || || ||||| || || ||||| |||
Sbjct 1169300 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 1169241
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| ||||||||| |||||||||||| | || || |||| ||||
Sbjct 1169240 TTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 1169181
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| |||||||| ||||| ||||||||
Sbjct 1169180 ATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169143
Score = 174 bits (192), Expect = 3e-38
Identities = 168/216 (78%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 68246 GCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCC 68305
||||| |||| ||| || |||||||| || |||||||| || || || || || | |||
Sbjct 1169586 GCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCC 1169527
Query 68306 ATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTT 68365
|||||| | ||| || ||||| || || | || || ||||| || || ||||| |||||
Sbjct 1169526 ATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTT 1169467
Query 68366 GTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425
||| || ||||| ||||||||| |||||||||||| | || || |||| ||||||
Sbjct 1169466 GTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 1169407
Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || ||||| |||||||| ||||| ||||||||
Sbjct 1169406 GGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169371
Score = 168 bits (186), Expect = 1e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 68246 GCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCC 68305
||||| |||| ||| || |||||||| || |||||||| || || || || || | |||
Sbjct 1171015 GCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCC 1170956
Query 68306 ATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTT 68365
|||||| | ||| |||||||| || || | || || ||||| || || ||||| |||||
Sbjct 1170955 ATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTT 1170896
Query 68366 GTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425
||| || ||||| |||||||| |||||||||||| | || || |||| ||||||
Sbjct 1170895 GTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 1170836
Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || ||||| | |||||| ||||| ||||||||
Sbjct 1170835 GGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1170800
Score = 131 bits (144), Expect = 3e-25
Identities = 129/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| | ||||| | |||| ||| || |||||||| || |||||||| || || ||
Sbjct 1170798 CCTCCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1170739
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||||||| | ||| |||||||| || || | || || ||||| || ||
Sbjct 1170738 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1170679
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
||||| |||||||| || ||||| ||||||| | ||||||||||||
Sbjct 1170678 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGAAGTTCTCGATGGTGTC 1170632
>seq566
Length=2972453
Score = 158 bits (174), Expect = 2e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| |||| |||| ||| || || |||||||| |||||||| ||||| || || || |
Sbjct 801250 AGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 801309
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || | |||||| || || || ||||| || || ||||| || || ||||| |||
Sbjct 801310 CCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCC 801369
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|| || || ||||| ||||| ||| ||||||||||| | || || |||| ||||
Sbjct 801370 TTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 801429
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
||||| || || || |||||||| ||||| || |||||| ||
Sbjct 801430 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 801471
Score = 156 bits (172), Expect = 8e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| || || ||||||||||| |||||||| ||||| || || || | ||||| ||
Sbjct 801031 ACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 801090
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || || || ||||| || || ||||| || || |||||||| || || ||
Sbjct 801091 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGG 801150
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| ||| ||||||||||| | || || |||| ||||||||| ||
Sbjct 801151 ATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 801210
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| ||||| ||||||||
Sbjct 801211 CCGGTCAGGGTCTTCACGAAGATCTGCAT 801239
>seq303
Length=12076657
Score = 89.7 bits (98), Expect = 9e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||||| ||| ||||||||||| ||| | || || || | || | ||||||||
Sbjct 4860421 ACCAAGTATAGGGTGGACTCTTTCTGGGTATTGTAGTCTAATGAAGTGCAGCCATCTTCC 4860362
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || | || ||||| || | ||||| |||||| ||||
Sbjct 4860361 AGCTGTTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGCGAGATGCCCTCCTTGGCTTGG 4860302
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
| || || ||||| |||| | ||||| | || || || | || |||||| ||
Sbjct 4860301 ACTTTGGCTTTGACATCCTCACTAGTGTCACTGGGCTCAACCTCGAGGGAGATGGTCTTG 4860242
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGC 68459
||| | ||||||| || || ||||||
Sbjct 4860241 CCCATCAGGGTCTCCACAAAGATCTGC 4860215
>seq890
Length=2318022
Score = 84.2 bits (92), Expect = 4e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||| | | ||||| ||||| |||| || || | ||||| || | ||||| ||
Sbjct 119645 ACCAAGCGCAAGGTGGATTCTTTCTGGAGATTGTAGCCTGAGAGAGTGCGGCCATCCTCC 119586
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || | || |||| ||||| ||||| |||||||||||
Sbjct 119585 AGCTGTTTGCCCGCAAAAATTAGACGCTGCTGGTGAGGTGGGATGCCCTCCTTGTCTTGG 119526
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
| || | ||||| ||| ||||||| | | | || | |||||| |||||
Sbjct 119525 ACTTTGGTTTTGACATTCTCAGTGGTGTCACCGGGCTTGACCGTGAGGGTGATAGTTTTA 119466
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| | || | ||| || || ||||||||
Sbjct 119465 CCCATCAGAGGCTTCACAAAGATCTGCAT 119437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921605361505880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |