Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq566 95.1 1e-14
seq1477 86.0 5e-12
>seq566
Length=2972453
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232
||| | ||| | || || ||||| || ||||||||||| | ||| || ||| ||
Sbjct 801030 AACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTC 801089
Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292
|| || || || || ||||||| | ||| ||||| || || ||||||||||| ||
Sbjct 801090 CAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTG 801149
Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
||||| || | | ||| | |||||| ||| || || |||| ||| | || ||
Sbjct 801150 GATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 801209
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||||||| || || || || ||||||||
Sbjct 801210 GCCGGTCAGGGTCTTCACGAAGATCTGCAT 801239
>seq1477
Length=8748460
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/228 (69%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| |||| |||||||| | | ||| | || || || || ||||||||||| ||
Sbjct 7843772 ACCACCACAAAGTCTCAACA--AGATGAA--GTGGACTCCTTCTGAATGTTGTAGTCAGA 7843827
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||||| ||||| || ||||| |||| | || ||| || | |||||
Sbjct 7843828 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACTCTGCTGATAAGGAGG 7843887
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| |||| || || |||||| ||| | ||| | || || | || ||||||
Sbjct 7843888 AATTTCTTCCTTATCCCGAATCTTGGCTTTCATACTTTCTATTGTATCCGAGGGTTCGAC 7843947
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | | || || || || || ||||| |||||| | |||||
Sbjct 7843948 CTCAACACTGATGGTCTTTCCTGTAAGGGTTTTCACAAAATTTTGCAT 7843995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420126826946148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |