Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq566 134 3e-26
seq424 95.1 3e-14
>seq566
Length=2972453
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | || | ||| || ||||| | ||| ||||| ||||| || || || |
Sbjct 801013 CCACCCCTCAGACGAAGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAA 801072
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || ||||| ||||| || | ||| || | |||
Sbjct 801073 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 801132
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||||||||||||||| || || ||||||||||| || | || || | || ||
Sbjct 801133 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 801192
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct 801193 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 801239
Score = 114 bits (126), Expect = 3e-20
Identities = 145/198 (73%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || || || | || || ||||| |||
Sbjct 801277 TCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAG 801336
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || |||||| || || || ||||||||||| || || ||||||
Sbjct 801337 ATGAGCCTCTGCTGG---TCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACG 801393
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| || | || || | || || || || ||||| ||||| |||||||| |||||
Sbjct 801394 TTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 801453
Query 288460 ACGAATATCTGCATTATG 288477
||||| || |||||| ||
Sbjct 801454 ACGAAGATTTGCATTTTG 801471
>seq424
Length=11562000
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||| ||||| | || ||| | ||||| || | ||||| || | |
Sbjct 7321986 TCTTTCTGGATATTGTAGTCTGAGAAAGTGTGGCCGTCCTCCAGCTGTTTGCCCACACAA 7321927
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||| |||| | ||||| || || || || |||||||| ||||| || ||
Sbjct 7321926 ATCAGACGCCGTTGGTCAAGCGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACCTTC 7321867
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| | | || || || || ||||| ||||| || || | |||| ||
Sbjct 7321866 TCCATGGTATCATTGGTCTCAACGTCAAGGGTGATGGTCTTGCCCATCCG--TCTTCACA 7321809
Query 288463 AATATCTGCAT 288473
|||||||||||
Sbjct 7321808 AATATCTGCAT 7321798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179632045917762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |