Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq536 138 3e-27
seq1153 136 9e-27
seq566 136 9e-27
seq1477 118 2e-21
seq602 86.0 1e-11
seq825 84.2 5e-11
seq435 84.2 5e-11
>seq536
Length=25944906
Score = 138 bits (152), Expect = 3e-27
Identities = 158/212 (75%), Gaps = 8/212 (4%)
Strand=Plus/Minus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
|||| || ||||| |||||||| ||||||||||| | |||||||||| |||| | |
Sbjct 23770643 AGTCCCAACACAAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCA----AAGTACAT 23770588
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
||||||||||| ||||| || || ||||| | | |||||| || |||| | ||||||
Sbjct 23770587 CCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCTGATCAGGAAGAGTTCCTT-- 23770530
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
||||||||||| |||||| ||| | || | || | ||| || || | |||
Sbjct 23770529 --ATCCTGAATCTTGGCCTTCACATTTTCTATTGTATTTGAAGGTTCAACCTCAAGAGTG 23770472
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623
|| ||||| ||| | ||||||||||| |||||
Sbjct 23770471 ATGGTCTTCCCCATAAGAGTTTTCACGAAAAT 23770440
>seq1153
Length=1501042
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||||||||| |||||||| |||| ||||||||||| || || | |||||
Sbjct 1169583 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1169524
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 1169523 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1169464
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| ||| |||| |||||| | | || || |||| ||||| ||
Sbjct 1169463 CTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1169404
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| ||||| || || ||||| || || ||
Sbjct 1169403 CTTGCCCGTCAGGGTCTTCACGAAGATCTG 1169374
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||||
Sbjct 1169354 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1169295
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || ||||| ||||| | | ||||||||| || || || || |||
Sbjct 1169294 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1169235
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || |||| ||||| |||
Sbjct 1169234 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1169175
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || ||||| || || ||
Sbjct 1169174 TTGCCCGTCAGGGTCTTCACGAAGATCTG 1169146
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||||||||| |||||||| |||| ||||||||||| || || | |||||
Sbjct 1171012 CAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 1170953
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || ||||| ||||| | | ||||||||| || || || || ||
Sbjct 1170952 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1170893
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| || |||| |||||| | | || || |||| ||||| ||
Sbjct 1170892 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 1170833
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| ||||| | || ||||| || || ||
Sbjct 1170832 CTTGCCCGTCAAGGTCTTCACGAAGATCTG 1170803
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||||
Sbjct 1169126 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1169067
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || ||||| ||||| | | ||||||||| || || || ||| |||
Sbjct 1169066 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCC 1169007
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| || || || | |||||| | | || || |||| ||||| |||
Sbjct 1169006 TGGATCTTCCCTTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1168947
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| | || ||||| || || ||
Sbjct 1168946 TTGCCCGTCAAGGTCTTCACGAAGATCTG 1168918
Score = 98.7 bits (108), Expect = 2e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| |||||||| |||| ||||||||||| || || | ||||||
Sbjct 1170783 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1170724
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || ||||| ||||| | | ||||||||| || || || || |||
Sbjct 1170723 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1170664
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569
|| ||||| ||| | | |||| ||||||
Sbjct 1170663 TGGATCTTCGCCTTGAAGTTCTCGATGGTGTC 1170632
>seq566
Length=2972453
Score = 136 bits (150), Expect = 9e-27
Identities = 162/219 (74%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||
Sbjct 801255 CAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 801314
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||||| || || |||||||| | ||||||||| || || || || ||
Sbjct 801315 CTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 801374
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||||||| ||||| |||||| | | || || |||| ||||| ||
Sbjct 801375 CTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 801434
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
||| || || || || ||||| || ||||| ||||||
Sbjct 801435 CTTGCCGGTCAGGGTCTTCACGAAGATTTG---CATTTT 801470
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || || |||||||| ||||| || |||| |||||| |||| | ||| | |||||
Sbjct 801028 AGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 801087
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || || |||||||| | ||||||||| || || |||||| |||
Sbjct 801088 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 801147
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||||||| ||||| |||||| | | || || |||| ||||| |||
Sbjct 801148 TGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 801207
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 801208 TTGCCGGTCAGGGTCTTCACGAAGATCTG 801236
>seq1477
Length=8748460
Score = 118 bits (130), Expect = 2e-21
Identities = 157/216 (73%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470
|||||||| ||||| || || | |||||||| || | ||||||||||| |||||| |
Sbjct 7843781 AAGTCTCA--ACAAGATGAAGTG--GACTCCTTCTGAATGTTGTAGTCAGACAAAGTACG 7843836
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
|||||||||||| ||||| || || ||||| | || |||||| | ||| |||| ||||
Sbjct 7843837 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACTCTGCTGATAAGGAGGAATTTCTTC 7843896
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
||| ||||||| |||| ||| | || || | | ||| || || | |
Sbjct 7843897 CTTATCCCGAATCTTGGCTTTCATACTTTCTATTGTATCCGAGGGTTCGACCTCAACACT 7843956
Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| ||||| || || || |||||||||||| ||||
Sbjct 7843957 GATGGTCTTTCCTGTAAGGGTTTTCACAAAATTTTG 7843992
>seq602
Length=3264241
Score = 86.0 bits (94), Expect = 1e-11
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||||| || || || ||| | ||||||||||| | ||||||||||| |||||
Sbjct 2398645 CGAAGTCTCAACACGAGATGAAGAATGGACTCCTTTTGAATGTTGTAGTCAGTCAAAGGA 2398586
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|||||||| || ||| | || || | ||| || | |||||| | ||| |||| ||
Sbjct 2398585 TGTCCATCTT-CAATTGCCTGCCAGCAAGGATCAGTCTCTGCTGAACAGGAGGAATTTCT 2398527
Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
|| ||||||||| | | || || | | | || || | | ||| || || |
Sbjct 2398526 TCCTTATCCTGAATCCTGGCCTTTAACATTTCCTATTGTATCCGAGGGTTCCACCTCGAG 2398467
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623
||||| ||||| || | ||||||| ||| ||||
Sbjct 2398466 AGTGATGGTCTTCACCCTAAGAGTTTCCACGGAAAT 2398431
>seq825
Length=8281254
Score = 84.2 bits (92), Expect = 5e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470
||||| || | ||| || ||||| ||||||||||| | | | |||||| |||||
Sbjct 4962354 AAGTCGCAACAGAAGATGAAGAGTGGACTCCTTTTGAATGCTACAGTCAGATAAAGTATG 4962413
Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
|||||||||||| ||||| | | |||||| || | ||||| || ||| | ||||||
Sbjct 4962414 TCCATCTTCCAGTTGCTTGCAAGAGAAGATCAGTCTGTGCTGATCAGGAGGAGTTCCTTT 4962473
Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590
||||||||||| ||| || ||| | || || | ||| || || | ||
Sbjct 4962474 CTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAGT 4962533
Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| |||| | | | | ||||||| ||||| ||
Sbjct 4962534 GATGATCTTCCTCATATGGGTTTTCATGAAAATCTG 4962569
>seq435
Length=12339182
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
||||||| | ||||||||||| |||||| | |||||||||||| ||||| || || ||||
Sbjct 10097282 CCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 10097341
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| | | |||||| || ||| |||||||
Sbjct 10097342 TCAATCTCTGCTGATCAGGAGGAATTCCT 10097370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178899259804093
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