Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1436 183 1e-40
seq1204 143 1e-28
seq969 105 3e-17
seq523 93.3 2e-13
seq582 87.8 7e-12
>seq1436
Length=545704
Score = 183 bits (202), Expect = 1e-40
Identities = 462/697 (66%), Gaps = 13/697 (2%)
Strand=Plus/Plus
Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973
|| ||||| || || || || ||||||| ||||| || || || | ||| | || ||
Sbjct 189418 GCCATTGGCATCGACCTGGGCACCACCTACTCATGCGTGGGGGTGTTCCAGCACGGTAAG 189477
Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----TT 451029
||||| || || || |||||||| || || || || || || | || || ||
Sbjct 189478 GTAGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCC--CA--GCTATGTGGCCTT 189533
Query 451030 TACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCA 451088
|| ||| | ||| | || | ||| | || || || | | | |||| ||| ||
Sbjct 189534 CACCGATACGGAACGGCTCATTGGGGATGCGGCCAAGAACCA-GGTAGCCATGAATCCCC 189592
Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148
| ||||| || | |||||| |||||| | |||||| | | | | ||||| | || |
Sbjct 189593 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTGC 189652
Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208
| ||| | ||| || ||| | | ||| | ||| || ||| |||||| | |
Sbjct 189653 AGGCAGATATGAAACACTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAA 189712
Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268
||| || ||||| || | ||| |||| |||||| ||||| || |||||||| |
Sbjct 189713 CAGTGTCCTACAAAGGGGAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGTAC 189772
Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328
| || || ||||| || || || || | | | || || || || |||| || |
Sbjct 189773 TGACAAAGATGAAGGAGACTGCTGAGGCCTTTTTGGGCCACCCTGTCACCAATGCTGTGA 189832
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
| ||||| || ||||||||||||||| | || || ||||| || || |||||||| |
Sbjct 189833 TAACTGTGCCAGCTTATTTCAATGATTCTCAGCGTCAAGCCACCAAGGATGCAGGTGTGA 189892
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
|||| ||| | ||||| || ||||||| |||||||| ||||| ||||| | |||||||
Sbjct 189893 TTGCGGGTCTGAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCATATG 189952
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| ||| ||| | || | ||| | || | || | ||||| | |||||||
Sbjct 189953 GCTTAGATAAAGC---AGGTCAGGGAGAGCGACATGTCTTGATCTTTGACCTGGGTGGAG 190009
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
|||| |||| || | || | || || ||||| | |||||||||||||| ||
Sbjct 190010 GAACATTTGATGTGTCCATCCTGACCATAGATGATGGAATCTTTGAAGTAAAGGCCACAG 190069
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||| || || || || || || || || |||| ||
Sbjct 190070 CTGGGGACACCCACCTTGGTGGAGAGGACTTTGACAA 190106
>seq1204
Length=1977916
Score = 143 bits (158), Expect = 1e-28
Identities = 342/512 (67%), Gaps = 4/512 (1%)
Strand=Plus/Minus
Query 451981 TAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCT 452040
||||||| | || |||||||||||||| || |||||||| || || || ||||| || ||
Sbjct 41079 TAAGAGCATCAACCCTGATGAAGCTGTCGCTTATGGTGCAGCTGTCCAGGCAGCCATCCT 41020
Query 452041 AACAGG-TTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTAT 452099
| || || || |||||| | |||| | ||| | | || || || || || |
Sbjct 41019 TCCTGGAGACAAAT-CTGAAAATGTTCAAGATTTGCTGCTGTTGGAGGTCACTCCCCTTT 40961
Query 452100 CTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTA 452159
||||||| ||||||| ||||||||| | |||||| | | || || | || | |
Sbjct 40960 CTCTTGGCATTGAAACTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATTCTACCA 40901
Query 452160 TTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTA 452219
||||| |||| ||| || || || | ||| ||| ||||| || ||||| |
Sbjct 40900 TTCCTACTAAACAGACCCAGACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCA 40841
Query 452220 TTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTA 452279
|||| || | |||||| || ||||| ||||| ||||| || ||| || | |||
Sbjct 40840 TTCAGGTTTATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTACTTGGCAAGTTTG 40781
Query 452280 CTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATG 452339
|| || ||| | |||| || || |||||| ||||| |||||| ||||
Sbjct 40780 AACTCACAGGCATACGTCCTGCCCCCCATGGCGTTCCTCAGATTGAGGTTACCTTTGATA 40721
Query 452340 TTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAA- 452398
||||||| ||||| ||||| ||||| ||| || || || | |||||| ||||
Sbjct 40720 TTGATGCTAATGGCATTCTCAATGTCTCTGCTGTGGATAAGAGTACAGGAAAA-GAGAAT 40662
Query 452399 AAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTA 452458
|| || || || || || | ||| || || || ||||| ||||| |||||
Sbjct 40661 AAGATCACCATCACAAACAACAAAGGTCGCTTGAGCAAGGAAGACATTGAGCTCATGGTC 40602
Query 452459 GATGAAGCAGAAAAATTCAAGGATGATGATGA 452490
| ||||| || || | ||| | || |||||
Sbjct 40601 CAGGAAGCTGAGAAGTACAAAGCAGAAGATGA 40570
Score = 125 bits (138), Expect = 3e-23
Identities = 452/700 (65%), Gaps = 23/700 (3%)
Strand=Plus/Minus
Query 450919 TGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCA--AAATGGAAATGTA 450976
||| |||| |||||| ||||||| || ||||| |||| | | | | | |||| ||
Sbjct 42144 TGGCATTGGTCTTGGCACCACCTACTCTTGTGTGGGTGCCTTCTAGCACAGGGAAGTG-- 42087
Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036
||||| || || ||||| || ||| |||| || || | ||| ||||| ||
Sbjct 42086 GAAATAATTGCCAATGATCAGGGAAACTGAACCACCCCAAGTTATGTAGCCTTTACTGAC 42027
Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAA-TGGTAAATTCAAATGCCAAAAAC 451093
| ||| || | | || | ||||| || ||||| | | || | || ||| |||
Sbjct 42026 ACTGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAA---CGAACCCCACCAAC 41970
Query 451094 ACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAA 451153
||||| | |||||| ||||| | ||||| ||| | || |||| | ||| |||
Sbjct 41969 ACAGTTTTTGATGCCAAACGCCTGATTGGGCGTGGATTCGACGATGCTGTTGTCCAATCT 41910
Query 451154 GAGAAAAAATTCTTTTC--TTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211
|| | || || | | ||| || || ||| | || | |||| | | ||||
Sbjct 41909 GATATGAAGCACTGGCCCCTCATGGTG--GTGAATGATGCTGGCAGGCCCAAGGTCCAAG 41852
Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271
|| | || || || || || |||| ||| ||| || || | || ||||||||| | |
Sbjct 41851 TAGAATACAAGGGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTTTTGA 41792
Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331
| || || || |||| |||| || |||| | ||||| |||| ||| | |
Sbjct 41791 CAAAGATAAAGGAAATCACAGAGGCTTACCTTGGGAAGACTGTTACCAATGCTGTAGTCA 41732
Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391
| || || || ||||| || |||| || || || || || |||||||| ||| |||||
Sbjct 41731 CAGTACCTGCCTATTTTAACAATGCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTG 41672
Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAAC------CTACAGCAGCTGCTCTAGCAT 451445
||||| | ||||| ||| |||| || || | || | || || |||||| | || |
Sbjct 41671 CTGGTCTTAATGTACTTTGAATCATCAAAGTACAGCAGCCAACTGCTGCTGCTATTGCTT 41612
Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505
|||| ||| ||| || | || |||| ||| | | | ||||| || || |
Sbjct 41611 ATGGCTTAGAGAAA---AAGGTTGGAGCCGAAAGGAATGTGCTGATCTTTGACTTGGGAG 41555
Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565
| || ||| |||| || | || | |||||||||||| | ||||| || || | |
Sbjct 41554 GTGGCACTTTTGATGTGTCAATCCTCACTATTGAAGATGGGATCTTTGAGGTCAAATCTA 41495
Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
| ||| || || || |||| || ||||| |||| ||
Sbjct 41494 CTGCTGGAGACACCCACTTAGGTGGAGAAGACTTTGACAA 41455
>seq969
Length=21006342
Score = 105 bits (116), Expect = 3e-17
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| ||||||| ||||||| || || |||||||||||||| ||||| || |||||
Sbjct 18175858 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 18175799
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425
|||||||| ||| ||||||||| || |||||| | |||| || ||||| ||
Sbjct 18175798 AAAGATGCTGGAACTATTGCTGGATTGAATGTTATGAGAATCATCAATGAGCC 18175746
>seq523
Length=9440060
Score = 93.3 bits (102), Expect = 2e-13
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426
|| ||||||||||| || || || |||| |||| || ||||| | ||||||||||||
Sbjct 3165430 GCCACTAAAGATGCTGGCCAGATATCTGGACTAAACGTGCTTCGGGTAATTAATGAACCT 3165371
Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467
||||| |||||||| || ||||| |||| |||||| ||||
Sbjct 3165370 ACAGCTGCTGCTCTGGCTTATGGTCTAGACAAATCAGAAGA 3165330
>seq582
Length=7536170
Score = 87.8 bits (96), Expect = 7e-12
Identities = 248/380 (65%), Gaps = 6/380 (2%)
Strand=Plus/Minus
Query 451226 GAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAA 451285
|| || |||| ||| ||| || || | | ||||||||| | || || ||||| |||
Sbjct 4528081 GAGACCAAAAGTTTCTGTCCAGAGGAGGTGCCCTCTATGGTTTTGACAAAGATGAAGGAA 4528022
Query 451286 ACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTAT 451345
|| |||| || |||| | |||| |||| ||| | || || || || |||
Sbjct 4528021 ACCACAGAGGCTTACCTTGGGAAGACTGTTAACAATGCTGTAGTCACAGTACCTGCCTAT 4527962
Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405
|| || | | || | | || || ||| |||| ||| ||||||||||| | |||||
Sbjct 4527961 TTTAACAACTCTCAGCATTAGGCTACCAAACATGCTGGAAATATTGCTGGTCTTAATGTA 4527902
Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAA 451465
|| ||||| || | ||| || || || |||||| | || ||||| ||| || |||
Sbjct 4527901 CTACGAATCATCAGTGAGCCAACTGCTGCTGCTATTGCTTATGGCTTAGACAA---AAAG 4527845
Query 451466 GAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCT 451525
| || |||| ||| | | | ||||| || || || || ||| |||| ||
Sbjct 4527844 GTTGGAGCTGAAAGGAATGTGCTGATCTTTGACTTGGGAGGTGGCACTTTTGATGGGTCA 4527785
Query 451526 GTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTA 451585
| | | | |||||||||| | ||||| || ||| | | ||| || || || ||
Sbjct 4527784 ATCCCCACTACTGAAGATGGGATCTTTGAGGTCAAGTCTGC---TGGAGACACCCACTTA 4527728
Query 451586 GGAGGTGAAGATATTGATAA 451605
|| || ||||| |||| ||
Sbjct 4527727 GGTGGAGAAGACTTTGACAA 4527708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975680960753732
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