Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq566 138 3e-27
seq1153 122 2e-22
seq536 98.7 2e-15
seq648 89.7 1e-12
seq1477 86.0 1e-11
seq825 84.2 5e-11
>seq566
Length=2972453
Score = 138 bits (152), Expect = 3e-27
Identities = 159/213 (75%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || || |||||||||||||| || || |||||||| | |||||| | ||||| ||
Sbjct 801030 AACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTC 801089
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| ||||| ||||| || | || ||||| || || ||||||||||| || ||
Sbjct 801090 CAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTG 801149
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107
|| || ||| ||||| || |||||||| ||| ||||| || ||||| | ||
Sbjct 801150 GATCTTGGCCTTCACGTTTTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGT 801206
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || |||| || || ||||| | |||||
Sbjct 801207 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 801239
>seq1153
Length=1501042
Score = 122 bits (134), Expect = 2e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | |||||||||
Sbjct 1169123 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1169064
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||||| | | || ||||| || || ||||| ||||| || ||
Sbjct 1169063 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCCTGG 1169004
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||||| |||||||||||||| ||| ||||| || ||||| | |||
Sbjct 1169003 ATCTTCCCTTTGACATTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 1168947
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || ||||| || || ||||| | |||||
Sbjct 1168946 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1168915
Score = 122 bits (134), Expect = 2e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | |||||||||
Sbjct 1169351 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1169292
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||||| | | || ||||| || || ||||| || ||||| ||
Sbjct 1169291 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1169232
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || |||||||||||| |||||||| ||| ||||| || ||||| | |||
Sbjct 1169231 ATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 1169175
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || ||||| | |||||
Sbjct 1169174 TTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169143
Score = 122 bits (134), Expect = 2e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | |||||||||
Sbjct 1169579 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1169520
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||||| | | || ||||| || || ||||| || ||||| ||
Sbjct 1169519 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1169460
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || |||||||||||| |||||||| ||| ||||| || ||||| | |||
Sbjct 1169459 ATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 1169403
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || |||| || || ||||| | |||||
Sbjct 1169402 TTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169371
Score = 122 bits (134), Expect = 2e-22
Identities = 155/212 (73%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| || | || || | |||||||||
Sbjct 1171008 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1170949
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||||| | | || ||||| || || ||||| || ||||| ||
Sbjct 1170948 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1170889
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || |||||| ||||| |||||||| ||| ||||| || ||||| | |||
Sbjct 1170888 ATCTTCGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATGGTC 1170832
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || ||||| || || ||||| | |||||
Sbjct 1170831 TTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1170800
Score = 104 bits (114), Expect = 5e-17
Identities = 120/162 (74%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| ||||||||||| || || || ||||| || | || ||
Sbjct 1170793 TCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 1170734
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||||||| ||||| || || || ||||| | | || ||||| || || |||||
Sbjct 1170733 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 1170674
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|| ||||| || || || ||||| |||||| ||||||||
Sbjct 1170673 CTCCTTGTCCTGGATCTTCGCCTTGAAGTTCTCGATGGTGTC 1170632
>seq536
Length=25944906
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 8/210 (4%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||||| ||| ||||| || ||||||||||| |||||||| ||||| || | ||| |
Sbjct 23770644 GAGTCCCAACACAAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACA 23770589
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|||||||| || ||||| || || ||||| ||| || || || ||||| | |||
Sbjct 23770588 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTCTGCTGATC---AGGAA-GAGTTC 23770533
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || ||||| || ||| || || || || || | ||| ||| || ||||| ||
Sbjct 23770532 CTTATCCTGAATCTTGGCCTTCACATTTTCTATTGTATTTGAAGGTTCAACCTCAAGAGT 23770473
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| ||||| || | | |||||| |||||
Sbjct 23770472 GATGGTCTTCCCCATAAGAGTTTTCACGAA 23770443
>seq648
Length=20061788
Score = 89.7 bits (98), Expect = 1e-12
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||||||||| || |||||| | || | ||||| ||| | || |||||
Sbjct 12805514 GTGCAGGGTGGACTCTTTCTGGATATTGCAGTCTGACAGAGTGTGGCCAGCCTCCAGCTG 12805455
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || ||||| || | | || ||| | || || |||| ||||||||||| |||||
Sbjct 12805454 TTTGCCCGCGAAAATCGGATGCTGCTGGACAGGTGGGGTGCCCTCTTTGTCTTGGATTTT 12805395
Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080
|||||||||||| |||||||
Sbjct 12805394 GACTTTGACGTTCTCAGTGGTGTC 12805371
>seq1477
Length=8748460
Score = 86.0 bits (94), Expect = 1e-11
Identities = 160/229 (70%), Gaps = 11/229 (5%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| |||| ||||| ||||||| || ||||| ||||| || | | ||| |
Sbjct 7843782 AGTCTCAA--CAAGATGAAG--TGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGT 7843837
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || ||||| | | || || | |||||||| ||||
Sbjct 7843838 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACTCTGCTGATAAGGAGGAATTTCTTCC 7843897
Query 195043 TTGTCTTGAATTTTTTGCTTG---ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099
|| || |||| || |||| || |||| || || ||||| ||| || ||||
Sbjct 7843898 TTATCCCGAATCTTG-GCTTTCATACTTTCT--ATTGTATCCGAGGGTTCGACCTCAACA 7843954
Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTT 195148
| | ||||||||||| | ||||| || || |||||| | |||||
Sbjct 7843955 CTGATGGTCTTTCCTGTAAGGGTTTTCACAAAATTTTGCATCT-TGGTT 7844002
>seq825
Length=8281254
Score = 84.2 bits (92), Expect = 5e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| ||| | ||| |||||||||||||| |||||||| | | || | | |||
Sbjct 4962355 AGTCGCAACAGAAGATGAAGAGTGGACTCCTTTTGAATGCTACAGTCAGATAAAGTATGT 4962414
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| | | |||||| |||| || || || |||||| | ||||
Sbjct 4962415 CCATCTTCCAGTTGCTTGCAAGAGAAGATCAGTCTGTGCTGATCAGGAGGAGTTCCTTTC 4962474
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
|| || ||||| || ||| || || || || || ||| | ||| || ||||| ||
Sbjct 4962475 TTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAGT 4962533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109460575670393
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