Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 131 1e-25
seq890 96.9 2e-15
seq566 96.9 2e-15
>seq1153
Length=1501042
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||||||| | || |||| ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1169597 CCCCCCCTCAAGCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1169538
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| ||||||||||| |||||||| || | | |||||||| | ||
Sbjct 1169537 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1169478
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| ||||||||||| |||||| |||||| | || | |||| || ||| ||
Sbjct 1169477 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1169418
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| ||||| || ||||| || |||||||| |||||||||||
Sbjct 1169417 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169371
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||||||| | || |||| ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1171026 CCCCCCCTCAAGCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1170967
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| ||||||||||| |||||||| || | | |||||||| | ||
Sbjct 1170966 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1170907
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| |||||| ||||| || || || | |||| || ||| |
Sbjct 1170906 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 1170849
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| ||||| || ||||| | |||||||| |||||||||||
Sbjct 1170848 CCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1170800
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 1169351 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1169292
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | |||||||| | || | |||||||||||
Sbjct 1169291 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1169232
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| |||||| | || | |||| || ||| || || | ||| ||||| ||
Sbjct 1169231 ATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 1169172
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || |||||||| |||||||||||
Sbjct 1169171 CCCGTCAGGGTCTTCACGAAGATCTGCAT 1169143
Score = 109 bits (120), Expect = 4e-19
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || |||| |||
Sbjct 1169123 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 1169064
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| |||||||| || | | |||||||| | || | ||||| || ||
Sbjct 1169063 AGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCCTGG 1169004
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|||||| |||||| || || || | |||| || ||| || || | ||| ||||| |
Sbjct 1169003 ATCTTCCCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCT 1168946
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| ||||| | |||||||| |||||||||||
Sbjct 1168945 TGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1168915
>seq890
Length=2318022
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||| | | ||| ||||||||| | || ||| | || || | || |||| |||
Sbjct 119645 ACCAAGCGCAAGGTGGATTCTTTCTGGAGATTGTAGCCTGAGAGAGTGCGGCCATCCTCC 119586
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || ||||| ||||| || ||||||| | || | |||||||||||
Sbjct 119585 AGCTGTTTGCCCGCAAAAATTAGACGCTGCTGGTGAGGTGGGATGCCCTCCTTGTCTTGG 119526
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
| || |||||| || || | | ||||||| || || || ||| || ||||
Sbjct 119525 ACTTTGGTTTTGAC--ATTCTCAGTGGTGTCACCGGGCTTGACCGTGAGGGTGATAGTTT 119468
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| ||| | |||| ||||||||||||||||||
Sbjct 119467 TACCCATCAGAGGCTTCACAAAGATCTGCAT 119437
>seq566
Length=2972453
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | | ||||| || | ||| |||||||| ||||| || || |||
Sbjct 801013 CCACCCCTCAGACGAAGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAA 801072
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| |||||||| || || ||||| || || | |||||||| | ||
Sbjct 801073 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 801132
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || || || || ||||| || ||| | | || | |||| || ||| ||
Sbjct 801133 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 801192
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| | ||| ||||| || || || || |||||||| ||||||||||||
Sbjct 801193 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATA 801240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324627748377912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |