Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq824 84.2 3e-11 >seq824 Length=577310 Score = 84.2 bits (92), Expect = 3e-11 Identities = 153/222 (69%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 197419 ACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCT 197478 ||||| |||||| |||| | ||||| || || ||| ||| | || || || | || Sbjct 485200 ACAGAGATTGAGCACGTCACCTGGAATGGTCCCCAAAAAGCTCTTGCTTTAGC-AGTCAC 485258 Query 197479 AAAGACG----TTACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAAC 197534 | | ||| ||| ||| ||||| |||||||||||| || | ||||| ||| Sbjct 485259 AGAAACGCAAGTTATCATTATGGACAAAAGCTACCAGAACCGACTGAACATCAGC---TG 485315 Query 197535 CAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCA 197594 |||||||| |||| || || |||||||| || | || || || || || || ||||| Sbjct 485316 GAACTACTCCTTGTCTATCAGCAACCTGACTTTGGAAGACGCAGGATCCTACAAAGCCCA 485375 Query 197595 AATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATT 197636 || ||| || ||||| | |||||| | | |||||||| Sbjct 485376 GATAAACCGCAAGAATTCTGAGGTCACCGCTGATGAGGAATT 485417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702175818284560