Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq824 87.8 2e-12
>seq824
Length=577310
Score = 87.8 bits (96), Expect = 2e-12
Identities = 171/252 (68%), Gaps = 8/252 (3%)
Strand=Plus/Minus
Query 2207 ACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGAT 2266
||||| |||| | | ||| ||| |||| | | || ||||| ||| ||| ||||
Sbjct 280994 ACTGAGGAACTTAGAAGTGGCCAACCACACTTGGCGATCCGAGAATGGGACCTGTCAGAT 280935
Query 2267 CCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTT 2326
||| |||||||| ||||| ||| || |||||| ||| | | | ||||||| |
Sbjct 280934 CCACCTGACCTGCTCTGTGGAGAATATGAATGACGACAACCTAGTAAGGTGGGAGGTC-- 280877
Query 2327 GGGCAAGACGCTTCT----ACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACA 2382
||| || || | | | | || |||||||||| ||||||||||||| |||
Sbjct 280876 --GCAGGAAGCATATCTATAAGAGAAGCCAACCTCACTCTGTCCTGGGACCCCAAGAAGT 280819
Query 2383 GCAGTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGG 2442
||| || |||| ||||| ||||| || || || |||| ||| | || || ||| | |
Sbjct 280818 CCAGCGAAGAGAAGTACACCTGCATAGCTGAGAATCCTGTCAGCCAACTGTCCTTCTCTG 280759
Query 2443 TCTCGGCCCAGA 2454
| || ||||||
Sbjct 280758 TTTCCACCCAGA 280747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629271566126840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |