Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq515 84.2 6e-12
>seq515
Length=2727018
Score = 84.2 bits (92), Expect = 6e-12
Identities = 185/272 (68%), Gaps = 19/272 (7%)
Strand=Plus/Minus
Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024
||| || ||||| ||| ||||||| | || || || || || || | || |||||
Sbjct 2713354 TGGGTGCTATGGAAGAGTAGCTCCCCGTTCTGGCTTGGCTGCGAAACACTTCATAGATGT 2713295
Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084
| ||||| || || ||| ||| | ||| || || || |||||||| ||||||||||
Sbjct 2713294 AAGAGCTGGCGTCATAGATGAAGATTATAGAGGAAATGTGGGTGTTGTGCTATTTAATTT 2713235
Query 1085 TAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTTAATTTGTGA 1141
| || || ||| ||| | | || |||||| | ||||| ||| | |||| |||
Sbjct 2713234 TGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGATCGAATTGCACAGCTCATTTATGA 2713178
Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTC----CTTAGAGGATTCGGAAAG 1195
| | | |||| ||||| |||||| ||| ||| || || || | |||||
Sbjct 2713177 A----CGGATTTTTGATCCA--GAAATAGAGGAAGTTCAGGTTTTGGATGACACTGAAAG 2713124
Query 1196 GGGTTCTGCAGGATTTGGGTCTAC-CGGAAGA 1226
|||||| | ||| ||||| ||||| ||||||
Sbjct 2713123 GGGTTCAGGAGGTTTTGGTTCTACTGGGAAGA 2713092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138679164317724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |