Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1354 232 4e-55 seq1204 181 7e-40 seq582 168 4e-36 seq1085 163 2e-34 seq1436 161 6e-34 seq785 107 1e-17 seq858 104 2e-16 seq539 104 2e-16 seq542 89.7 3e-12 >seq1354 Length=3769240 Score = 232 bits (256), Expect = 4e-55 Identities = 380/542 (70%), Gaps = 12/542 (2%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||||| | | | || Sbjct 934337 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCTAGCACAGGAA 934396 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||||||||||||||| || || || |||| || ||| ||||| | ||||| Sbjct 934397 AGTGGAAATAATTGCCAATGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTAC 934456 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||||| | || || |||||||| || |||||| |||| || || || Sbjct 934457 TGACACTGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATGAACCCCACCAA 934516 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||||||| |||| || || ||| | ||||||||| Sbjct 934517 CACAGTTTTTGATGCCAAACACCTGATTGGACGTAGATTCGACGATGCTGTTGTCCAATC 934576 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | |||| | |||| || ||| | || | || ||| Sbjct 934577 TGATATGAAGCATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGATCCAAGT 934636 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTC--ACCGGAACAAATTTCTTCAATGGTTT 474683 |||||| | || || || ||| |||| || || | | ||||| ||||||| Sbjct 934637 AGAATACAAG--GGAGAGAC----CAAGTTTCTATCCAGAGGAGGTATCTTCTATGGTTT 934690 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTA 474742 | | || ||||| ||| ||| ||| | || ||||| | || || |||| ||| Sbjct 934691 TGACAAAGATGAAGGAAATCGCAGAG-GCTTACCTTGGGAAGCCTGTTACCAATGCTGTA 934749 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 | || || || || ||||||||||||||||| ||||| || || |||||||| |||| Sbjct 934750 GTCACAGTACCTGCCTATTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACT 934809 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||||||||| | || || || ||||| |||| || || || | ||||| Sbjct 934810 ATTGCTGGTCTTAATGTACTTCGAATCATCAATGAGCCAAACGCTGCTGCTATCGCTTAG 934869 Query 474863 GG 474864 || Sbjct 934870 GG 934871 >seq1204 Length=1977916 Score = 181 bits (200), Expect = 7e-40 Identities = 337/488 (69%), Gaps = 14/488 (3%) Strand=Plus/Minus Query 474387 AAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTA 474446 |||| ||||||||||||||||| || || || |||| || ||| ||||| | |||| Sbjct 42091 AAGTGGAAATAATTGCCAATGATCAGGGAAACTGAACCACCCCAAGTTATGTAGCCTTTA 42032 Query 474447 CTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTA 474506 |||| ||||||| | || || |||||||| || |||||| |||| | || || | Sbjct 42031 CTGACACTGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAACGAACCCCACCA 41972 Query 474507 ATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAAT 474566 | || |||||||||| ||| | ||||||| ||| || || ||| | |||||||| Sbjct 41971 ACACAGTTTTTGATGCCAAACGCCTGATTGGGCGTGGATTCGACGATGCTGTTGTCCAAT 41912 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 |||||||| || ||||| | | |||| | |||| || ||| | || | | ||| Sbjct 41911 CTGATATGAAGCACTGGCCCCTCATGGTGGTGAATGATGCTGGCAGGCCCAAGGTCCAAG 41852 Query 474627 --CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 |||||| | || || || ||| || | || || | | ||||| |||||||| Sbjct 41851 TAGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTTTT 41794 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTA 474742 | || || || ||| | | ||| | || ||||| |||| || || |||| ||| Sbjct 41793 GACAAAGATAAAGGAAATCACAGAG-GCTTACCTTGG-GAAGACTGTTACCAATGCTGTA 41736 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 | || || || || |||||||| || |||| ||||| || || |||||||| |||| Sbjct 41735 GTCACAGTACCTGCCTATTTTAACAATGCTCAGCGTCAGGCTACCAAAGATGCTGGAACT 41676 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATG------AACCAACAGCAGCCGCACTT 474856 ||||| ||||||||||| | | || || || | | ||||| || || || || Sbjct 41675 ATTGCTGGTCTTAATGTACTTTGAATCATCAAAGTACAGCAGCCAACTGCTGCTGCTATT 41616 Query 474857 GCTTATGG 474864 |||||||| Sbjct 41615 GCTTATGG 41608 Score = 122 bits (134), Expect = 6e-22 Identities = 466/718 (65%), Gaps = 14/718 (2%) Strand=Plus/Minus Query 475510 TGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGA 475569 ||| ||||| | |||||||| || | | | | |||| ||| |||||| | ||| Sbjct 41352 TGCCAAGCGTACACTTTCTTCCAGCACCTAGGCCAGTATTGAGATTGGTTCTCTATATGA 41293 Query 475570 AGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCT 475629 |||||| | | |||| |||||| | || |||||||| | | |||| || Sbjct 41292 AGGAATCAACTTCTATACCTCTATTACTCGTGCCTGGTTTGAAGAATTAAATACTGACCT 41233 Query 475630 CTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT-CAGAGATTCTAAACTTGACAAAT 475688 || | || | | || || || ||| ||| ||| ||| | || || ||||| | Sbjct 41232 GTTCTGTGGCACCCTGGGCCCTGTAGAGAAAGCTCTTCAG-GATGCCAAGCTAGACAAGT 41174 Query 475689 CACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA 475748 | || |||| || ||||| | | || ||||| ||| | || || || || ||||| Sbjct 41173 CTCAGATCCACGATATTGTCTTGGGGGGTGGTTCTACACGTATCCCCAAGATTC-AGAAA 41115 Query 475749 TGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCT 475807 | || | |||| ||||| || | | ||| | || | || |||||||||||| Sbjct 41114 CTTCTACAAGACTTTTTCAATGGGAAGGAACTGAATAAGAGCATCAACCCTGATGAAGCT 41055 Query 475808 GTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTA 475867 || || ||||| || |||||||| ||||| || | | || | || | |||| | Sbjct 41054 GTCGCTTATGGTGCAGCTGTCCAGGCAGCCATCCTTCCTGGAGA--CAAATCTGAAAATG 40997 Query 475868 AATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGA 475924 || ||| | || ||||| | || ||||| ||||| | || ||||||| | ||| Sbjct 40996 TTCAAGATT-TGCTGCTGTTGGAGGTCACTCCCCTTTCTCTTGGCATTGAAACTGCTGGT 40938 Query 475925 GGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTA 475984 || | |||||| ||| || | ||| || | || || ||| | | | Sbjct 40937 GGAGTCATGACTGTTCTCATCAAGCACAATTCTACCATTCCTACTAAACAGACCCAGACC 40878 Query 475985 TTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGA 476044 || | || || ||||| || || | ||| ||| || | | ||||||||| | Sbjct 40877 TTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAAGGTGAGCGT 40818 Query 476045 AAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCT 476104 | || || ||||| ||| |||||| | ||| | || ||| || | |||||| Sbjct 40817 GCCATGACCAAGGATAACAACCTACTTGGCAAGTTTGAACTCACAGGCATACGTCCTGCC 40758 Query 476105 CCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAAT 476164 ||| || |||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||| Sbjct 40757 CCCCATGGCGTTCCTCAGATTGAGGTTACCTTTGATATTGATGCTAATGGCATTCTCAAT 40698 Query 476165 GTTACTGCTTGTGATA--AATCTAGTAACAAGAGTAAAAATATAACTATTACAAACAA 476220 || ||||| |||| | | || || ||||| || || || || || |||||||| Sbjct 40697 GTCTCTGCTGTGGATAAGAGTACAGGAA-AAGAG-AATAAGATCACCATCACAAACAA 40642 >seq582 Length=7536170 Score = 168 bits (186), Expect = 4e-36 Identities = 365/539 (68%), Gaps = 14/539 (3%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||| || | || || Sbjct 4528384 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCCTCCAGCACGGGAA 4528325 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || ||| || ||| ||||| | ||||| Sbjct 4528324 AGTGGAAATAATTGCCAACGATCAGGGAAACCAAACCACCCCAAGTTATGTCGCCTTTAC 4528265 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||||| |||| |||||||| || |||||| |||| ||||| || Sbjct 4528264 TGACACTGAAC----TATT---GATGCTGCAAAGAATCAAGTTGCAATGAATCC---CAA 4528215 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||||||| ||| || || || | ||||||| Sbjct 4528214 CACAGTTTTTGATGCCAAACATCTGATTGGAGGTAGATTCGACAATGCTGTCATCCAATC 4528155 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 ||||||| |||||||| || | |||| | || | || ||| | || | || ||| Sbjct 4528154 TGATATGAAGCATTGGCCCTTCATGGTGGTGAACGATGCTGGCAGGCCCAAGGTACAAGT 4528095 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | ||| || || ||| || | || || | | | || |||||||| | Sbjct 4528094 AGAATACGAGAAAGAGACCAAAAGTTTCTGTCCAGAGGAGGTGCCCTCTATGGTTTTGAC 4528035 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATT 474745 || ||||| ||||| | ||| | || ||||| |||| || | |||| ||| | Sbjct 4528034 AAAGATGAAGGAAACCACAGAG-GCTTACCTTGG-GAAGACTGTTAACAATGCTGTAGTC 4527977 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || |||||||| | ||||| | | | || || ||| |||| |||| ||| Sbjct 4527976 ACAGTACCTGCCTATTTTAACAACTCTCAGCATTAGGCTACCAAACATGCTGGAAATATT 4527917 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || ||||||||||| |||| || || | ||| ||||| || || || |||||||||| Sbjct 4527916 GCTGGTCTTAATGTACTACGAATCATCAGTGAGCCAACTGCTGCTGCTATTGCTTATGG 4527858 Score = 136 bits (150), Expect = 3e-26 Identities = 453/692 (65%), Gaps = 12/692 (2%) Strand=Plus/Minus Query 475496 ACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTT 475555 |||||||| || || ||||| | | |||||||| || || | | | |||| ||| Sbjct 4527619 ACTGCTTGCGAGCGCACTAAGTGCACACTTTCTTCCAGCACCCAGGCCAGTATTGAGGTT 4527560 Query 475556 GATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGAT 475615 |||||||| | ||||||||| || | | |||| |||||| | || ||| |||| Sbjct 4527559 GATTCTCTATATGAAGGAATGGACTTTTATACCTCTATTACTCGTGCCTGGTTTAAAGAA 4527500 Query 475616 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT-CAGAGATTC 475674 | | |||| || || | | | || || || || ||| || ||| ||| | Sbjct 4527499 TTAAATGCTGACCTGTTCCGTGGCATCCTGGAGCCTGTAGAGAAAGCCCTTCAG-GATGC 4527441 Query 475675 TAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTG-TAGGAGGTTCAACAAGAATTC 475733 || ||| ||| || || |||| || ||||| |||| | || ||||| |||| || | Sbjct 4527440 CAAGTTTGTCAAGTCTCAGATCCACGATATTGT-CTTGATGGGTGGTTCTGCAAGTATCC 4527382 Query 475734 CAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA 475792 | || || ||||| | || | |||| ||||| || | ||| | || | Sbjct 4527381 CCAAGATTC-AGAAACTTCTACAAGACTTTTTCAATGGGAAGGAACCGAATAAGAGCATC 4527323 Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || |||||||| ||||| || ||||| || |||||||| ||||| || | || || | Sbjct 4527322 AACCCTGATGAGGCTGTCGCTTATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGA- 4527264 Query 475853 TCAGACGAGAAACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGT 475909 || | |||| || || ||| | || ||||| | || |||| ||||| | | Sbjct 4527263 -CAAATCTGAAAATACTCAAGATT-TGCTGCTGTTGGATGTCACTCGTCTTTCTCTTCGC 4527206 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | ||| || | |||||| ||| || | |||||| | || || | Sbjct 4527205 ATTGAAACTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCTACC 4527146 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||| | | || || | || || ||||| || || | ||| ||| || | Sbjct 4527145 AAACATACCCAAACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCATTCAGGTT 4527086 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAA 476089 | ||||||||| | | || | ||||| ||| |||||| | ||| | || | Sbjct 4527085 TATGAAGGTGAGCGTGCCATGACCAGGGATAACAACCTACTTGGCAAGTTTGAACTCACA 4527026 Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 || || |||||||| ||| | || |||||||| |||| || || |||||||||||||| Sbjct 4527025 GGCATACCTCCTGCCCCCCGGGGTGTTCCTCAGATTGGGGTCACCTTTGATATTGATGCT 4526966 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| ||||| ||||| ||||| ||||| Sbjct 4526965 AATGGCATTCTCAATGTCTCTGCTGTGGATAA 4526934 >seq1085 Length=18888332 Score = 163 bits (180), Expect = 2e-34 Identities = 365/541 (67%), Gaps = 24/541 (4%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||| | || | | || Sbjct 16908106 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACAGGAA 16908165 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| | || || || ||| || ||| ||||| | ||||| Sbjct 16908166 AGTGGAAATAATTGCCAACAATCAGGGAAACCAAACCACCCCAAGTTATGTCACCTTTAC 16908225 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| | |||| | ||||| |||||||| | || | | | | || Sbjct 16908226 TGACATGGAACGATTGATTGGTGATGCTGCAA----------TGAACCCCACC-----AA 16908270 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| | ||| ||| |||| ||||||||| | |||||||||| Sbjct 16908271 CACAGTTTTTGATGCCAAACGCCTGACTGGACGTAGATTTGATGATGCTGCTGTCCAATC 16908330 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | || | | |||| || ||| | || | | ||| Sbjct 16908331 TGATATGAAGCATTGGCCCTTCATGGCGGTGAATGATGCTGGCAGGCCCAAGGTCCAAGT 16908390 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 |||||| | || || || ||| || | || || | | ||||| |||||||| Sbjct 16908391 AGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTTTTG 16908448 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743 | || ||||| ||| ||| ||| | || ||| || | || || || |||| ||| Sbjct 16908449 ACAAAGATGAAGGAAATCGCAGAG-GCTTACCTT-GAGAGGACTGTTACCAATGCTGTAG 16908506 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || |||||||| |||||||| |||| || || |||||||| |||| | Sbjct 16908507 TCACAGTACCTGCCTATTTTAACGATTCTCAGTGTCAGGCTACCAAAGATGCTGGAACTA 16908566 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 ||| ||||||||||| | | || || | ||| || || || || | ||||||||| Sbjct 16908567 CTGCTGGTCTTAATGTACTTTGAATCATCACTGAGCCCACTGCTGCTAC-TTTGCTTATG 16908625 Query 474864 G 474864 | Sbjct 16908626 G 16908626 >seq1436 Length=545704 Score = 161 bits (178), Expect = 6e-34 Identities = 368/551 (67%), Gaps = 2/551 (0%) Strand=Plus/Plus Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383 |||| || ||||| || || | || || || ||| || || | || | || | | Sbjct 189413 GAATGGCCATTGGCATCGACCTGGGCACCACCTACTCATGCGTGGGGGTGTTCCAGCACG 189472 Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443 |||| ||||| || |||||||||||||| || || | || || || ||||| | | Sbjct 189473 GTAAGGTAGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCCT 189532 Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503 | || || || |||| || ||||| ||||| || || | || | || ||||| Sbjct 189533 TCACCGATACGGAACGGCTCATTGGGGATGCGGCCAAGAACCAGGTAGCCATGAATCCCC 189592 Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563 || ||| | |||||||| ||| | ||||||| | || ||| ||||| | || | Sbjct 189593 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTGC 189652 Query 474564 AATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAG 474623 | | |||||| || ||||||||| | || || |||| || || || || | || Sbjct 189653 AGGCAGATATGAAACACTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAA 189712 Query 474624 AAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683 || || ||| || | ||| || | || || |||| ||||| ||||| Sbjct 189713 CAGTGTCCTACAAAGGGGAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGTAC 189772 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTA 474742 | | || ||||| | || || ||| | | | | || || || || |||| || Sbjct 189773 TGACAAAGATGAAGGAGACTGCTGAGGCCTTTT-TGGGCCACCCTGTCACCAATGCTGTG 189831 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 || ||||| ||||| ||||| ||||||||||| |||||||| || || ||||| || Sbjct 189832 ATAACTGTGCCAGCTTATTTCAATGATTCTCAGCGTCAAGCCACCAAGGATGCAGGTGTG 189891 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||| ||||| || | ||||| |||||||| ||||| || || |||| ||| Sbjct 189892 ATTGCGGGTCTGAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCATAT 189951 Query 474863 GGTCTTGATAA 474873 || | ||||| Sbjct 189952 GGCTTAGATAA 189962 >seq785 Length=2367675 Score = 107 bits (118), Expect = 1e-17 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 || ||| |||| ||| | || || || || |||||||| |||||||| ||||| || || Sbjct 637549 GTTACTAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGCGTCAGGCTACC 637608 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847 |||||||| |||| ||||| ||||||||||| | || || || ||||| |||||||| Sbjct 637609 AAAGATGCTGGAACTATTGCCGGTCTTAATGTACTTCGAATCATCAATGAGCCAACAGCT 637668 Query 474848 GCCGCACTTGCTTATGG 474864 || || | ||||| || Sbjct 637669 GCTGCTATCGCTTACGG 637685 Score = 96.9 bits (106), Expect = 2e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||||| || | || || Sbjct 636576 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCCAGCACGGGAA 636635 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || |||| || ||| ||||| | ||||| Sbjct 636636 AGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTAC 636695 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCA 474493 ||| || |||| | || || |||||||| || |||||| |||| Sbjct 636696 TGACACCGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCA 636741 Score = 86.0 bits (94), Expect = 4e-11 Identities = 124/170 (73%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || || ||||| ||| || || | ||| | || ||| || |||||||| ||| | Sbjct 639032 ACCAAGGATAACAACCTTCTGGGCAAGTTTGAACTCACAGGCATACCTCCTGCCCCCCGT 639091 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || |||||||| || || || || |||||||||||||| ||||| ||||| ||||| || Sbjct 639092 GGCGTTCCTCAGATCGAGGTCACCTTTGATATTGATGCTAATGGCATTCTCAATGTCTCT 639151 Query 476171 GCTTGTGATAA-ATC-TAGTAACAAGAGTAAAAATATAACTATTACAAAC 476218 ||| ||||| | | || || ||||| || || || || || |||||| Sbjct 639152 GCTGTGGATAAGAGCACAGGAA-AAGAG-AATAAGATCACCATCACAAAC 639199 >seq858 Length=6261838 Score = 104 bits (114), Expect = 2e-16 Identities = 180/260 (69%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 474350 ACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGAC 474409 || |||||| |||||| | ||| | || | ||||| ||||||||||||||||| Sbjct 4809407 ACCACTTACTCTTGTGTGGGTGTCTTCCAGCACCAGAAAGTGGAAATAATTGCCAATGAT 4809466 Query 474410 CAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGA 474469 | || || |||| || | | |||| | |||||||| |||| ||| | || Sbjct 4809467 AAGGGAAACTGAACCACCCGGTTATATCTAC--TTTACTGACACTGGTCATGTC---GGT 4809521 Query 474470 GATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGA 474529 | |||| | || |||||| |||| || || || || |||||||| | ||| | Sbjct 4809522 GCTGCTACAAAGAATCAAGTTGCAATAAACCCCACCAACACAGTTTTTGATACCAAATGC 4809581 Query 474530 TTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTT 474589 ||||||| ||| ||||||||| | |||||||||||||||| | || ||| |||| Sbjct 4809582 CTGATTGGATGTACGTTTGATGATGCTGTTGTCCAATCTGATATGAGACAGTGGTCTTTC 4809641 Query 474590 AAGGTGATAAATGTTGGTGG 474609 | |||| | |||| || ||| Sbjct 4809642 ATGGTGGTGAATGATGCTGG 4809661 >seq539 Length=22134583 Score = 104 bits (114), Expect = 2e-16 Identities = 263/393 (67%), Gaps = 8/393 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || |||||||| ||||| | ||||| | |||||||| ||||| || | || || | Sbjct 12709286 AACCCTGATGAGGCTGTCACTTATGGTACAGCTGTCCAGGCAGCCATCCTTTCTGGAGA- 12709228 Query 475853 TCAGACGAGAAACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGT 475909 || | |||| | || ||| | || ||||| | || ||||| ||||| | || Sbjct 12709227 -CAAATCTGAAAATGTTCAAGATT-TGCTGCTGTTGGATGTCACTCCCCTTTCTCTTGGC 12709170 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | ||| || | |||||| ||| || | |||||| | || || | Sbjct 12709169 ATTGAAACTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCTACC 12709110 Query 475970 AAAAA-ATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||| | | | | | | || | || |||||||| || || | ||| ||| || | Sbjct 12709109 AAACAGACCCAGACT-TTAACTACCTATTCTGACAACCAGCCTGGTGTGCTCATTCAGGT 12709051 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 | ||||||||| || || || | ||| ||| |||||| | ||| | || Sbjct 12709050 TTATGAAGGTGAGCGAGCCACGACCAAGGGTAACAACCTACTTGGCAAGTTTGAACTCAC 12708991 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 ||| || ||||||| ||| | || ||||||| ||||| || || |||||||||||||| Sbjct 12708990 AGGCATACCTCCTGTCCCCCGTGGCATTCCTCAGATTGAGGTCACCTTTGATATTGATGC 12708931 Query 476149 AAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| ||||| ||||| ||||| ||||| Sbjct 12708930 TAATGGCATTCTCAATGTCTCTGCTGTGGATAA 12708898 >seq542 Length=13476565 Score = 89.7 bits (98), Expect = 3e-12 Identities = 124/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 299108 GCTTCTGAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGAC 299167 ||||| || ||||| |||||||||||||| |||| ||| | |||| |||||| ||| Sbjct 10124618 GCTTCAGATGAAGATATTAAAAAAGCTTACCGAAAACAAGCACTCAAATTTCATCCGGAC 10124559 Query 299168 AGAAATAAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTAT--AGTA 299225 | || ||| |||| |||| || ||||| |||||| | | | |||||| |||| Sbjct 10124558 AAGAACAAATCTCCTCAAGCAGAGGAAAAATTTAAAGAGGTCGCAGAAGCTTATGAAGTA 10124499 Query 299226 TTCTTTCAGATCCAACCAAAAAAGAAGTATATGATAAATTTGGAGAAGAAGG 299277 || | ||||| | || | |||| |||||||| | ||||| || ||||| Sbjct 10124498 TTGAGT--GATCCTAAAAAGAGAGAAATATATGATCAGTTTGGGGAGGAAGG 10124449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268115758513892