Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq797 107 6e-18
seq546 84.2 6e-11
>seq797
Length=2049103
Score = 107 bits (118), Expect = 6e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || ||| || ||||| || || || || || | ||||| ||||| |||||
Sbjct 489093 ACCAGTCTCAGCTGTCTTGACAGCGGTGTCGATGAGCCCCTCGCGACCCCCCATGGCATG 489152
Query 302667 GAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCG 302725
|||||| | ||| || ||| || || | | ||||| |||| ||||| || ||
Sbjct 489153 GAAGAAGAACTCGGTGGG-CGTGAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCTCGGC 489211
Query 302726 CCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATG 302785
||||||| | |||| |||| | ||||| |||||||||| || || ||||| | |
Sbjct 489212 TCTCGGGCCCGTAGTCGTCCTTGATGAAGTGGGGCAGGGTCCGGTGCTTGAAGCCGAACG 489271
Query 302786 GGATACGCTTTCCATCAACGTTCTGCTGTCC 302816
|||| ||||| || || ||||||||||| ||
Sbjct 489272 GGATCCGCTTGCCCTCTACGTTCTGCTGCCC 489302
>seq546
Length=6731090
Score = 84.2 bits (92), Expect = 6e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 448887 GCTACGCCCGAGGAAATCAAGAAGGCATATAAACGACTCGCAATTAAACATCATCCTGAT 448946
||| | || ||||| || || ||| | ||| | | ||| ||||| || ||||||
Sbjct 4279647 GCTTCACCTGAGGACATTAAAAAGTCTTATCGTAAAGTGGCACTTAAATGGCACCCTGAT 4279588
Query 448947 AAAAATCCAGATAATAAAGCAGAGGCAGAGGAGAAATTCAAAGAGATTTCTCAAGCTTAT 449006
||||||||||| ||||||| ||| || ||| ||||||||||| | || | || |||
Sbjct 4279587 AAAAATCCAGAAAATAAAGAAGAAGCTGAGAGAAAATTCAAAGAAGTAGCTGAGGCATAT 4279528
Query 449007 GAAATTGTAACAAATAAAGAAAAA 449030
||| | || ||||||| ||||||
Sbjct 4279527 GAAGTATTATCAAATAACGAAAAA 4279504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471789709516423
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |