Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 113 4e-20
seq566 89.7 5e-13
seq1477 84.2 2e-11
>seq1153
Length=1501042
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || |||
Sbjct 1169371 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 1169430
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 1169431 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1169490
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||| ||||||||||| ||| | | | | |||| || || |||
Sbjct 1169491 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 1169550
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || ||| |||| |||| ||| | || ||
Sbjct 1169551 ATCCAGAAGGAGTCCACTCTCCACCTGGTCCTGCGCTTGAGGGGGGG 1169597
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || || || || || || || || || |||
Sbjct 1170800 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 1170859
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 1170860 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1170919
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| ||| | | | | |||| || || |||
Sbjct 1170920 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 1170979
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || ||| |||| |||| ||| | || ||
Sbjct 1170980 ATCCAGAAGGAGTCCACTCTCCACCTGGTCCTGCGCTTGAGGGGGGG 1171026
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || |||
Sbjct 1169143 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 1169202
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 1169203 GACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1169262
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||||||||||||||||||| ||| | | | | |||| || || |||
Sbjct 1169263 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 1169322
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || || || ||| ||||
Sbjct 1169323 ATCCAGAAGGAGTCCACTCTGCACCTGGT 1169351
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || | || || || || || || || || || || ||
Sbjct 1168912 ACCATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCC 1168971
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || ||| |||||||| || ||||| || || || || ||
Sbjct 1168972 AGTGACACCATTGAGAATGTCAAAGGGAAGATCCAGGAAAAAGAGGGCATCCCCCCTGAC 1169031
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || | |||||||||||||| ||||||||||| ||| | | | | |||| || ||
Sbjct 1169032 CAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 1169091
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| || ||||| || || || ||| ||||
Sbjct 1169092 AACATCCAGAAGGAGTCCACTCTGCACCTGGT 1169123
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || || || || || | ||||||||||||||||||
Sbjct 1170656 AAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGAGGTTGATCTTTGCCGGGAAA 1170715
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|||||||| ||| | | | | |||| || || ||||| || ||||| || || || |||
Sbjct 1170716 CAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCCACTCTGCAC 1170775
Query 24908 TTGGT 24912
||||
Sbjct 1170776 CTGGT 1170780
>seq566
Length=2972453
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || || || || || |||
Sbjct 801239 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 801180
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || |||||||| || |||||||| || || || || ||
Sbjct 801179 GACACCATCGAAAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAG 801120
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||||||| | | | || ||||| |||
Sbjct 801119 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGATTACAAC 801060
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || || || || || || || ||||
Sbjct 801059 ATCCAGAAAGAGTCCACTCTCCATCTGGT 801031
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || ||||| || || || || || || || || |||
Sbjct 801467 ATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 801408
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | |||| || || |||||||| || || || || || || || || ||
Sbjct 801407 GACACCATCGAAAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAG 801348
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | | |||||||| || || |||||||||||| | | | || ||||| |||
Sbjct 801347 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGATTACAAC 801288
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || || || ||||| || ||| |||| ||||
Sbjct 801287 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCG 801253
>seq1477
Length=8748460
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| | ||| | ||||| || || || || || || | | || || ||| || |
Sbjct 7843996 GATGCAAAATTTTGTGAAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTCGAACCCTC 7843937
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| | ||| ||||| | || || |||| ||| ||||| ||||
Sbjct 7843936 GGATACAATAGAAAGTATGAAAGCCAAGATTCGGGATAAGGAAGAAATTCCTCCTTATCA 7843877
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||||||||||||| || || || ||||| ||| | | |||| || || ||
Sbjct 7843876 GCAGAGTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 7843817
Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGTG 24913
|||||| ||||| || |||| || |||| ||
Sbjct 7843816 CATTCAGAAGGAGTC--CACTTCATCTTGTTG 7843787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449889282518120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |